RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 MTSS1LQ765P7 747 aa11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 SMAP1Q8IYB5 467 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 BCL7CQ8WUZ0 217 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 PGBD4Q96DM1 585 aa11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 RPS6KC1Q96S38 1066 aa11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 INO80BQ9C086 356 aaPredicted RBP11.14□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF623O75123 536 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 PSAPP07602 524 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 ATP4AP20648 1035 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 SFPQP23246 707 aaKnown RBP eCLIP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF76P36508 570 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 RPS9P46781 194 aaKnown RBP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 LAIR1Q6GTX8 287 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 TWF2Q6IBS0 349 aaKnown RBP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 TMTC2Q8N394 836 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 VN1R3Q9BXE9 311 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 GLT8D2Q9H1C3 349 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 TBC1D22BQ9NU19 505 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 FAN1Q9Y2M0 1017 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 PATJQ8NI35 1801 aa11.13□□□□□ -0.63
SH2D4A-202ENST00000518040 FAM208BQ5VWN6 2430 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 FAM170BA6NMN3 283 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 DDX39AO00148 427 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 LRRN2O75325 713 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 OFD1O75665 1012 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 CALM1P0DP23 149 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 CALM2P0DP24 149 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 CALM3P0DP25 149 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 AK2P54819 239 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 GPC5P78333 572 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 SLC44A4Q53GD3 710 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 GPR65Q8IYL9 337 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 CELF5Q8N6W0 485 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 CLDN23Q96B33 292 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 NRBP2Q9NSY0 501 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 MRPS17Q9Y2R5 130 aaKnown RBP11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 PCDHA10Q9Y5I2 948 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 DOCK8Q8NF50 2099 aa11.12□□□□□ -0.63
SH2D4A-202ENST00000518040 IPO5O00410 1097 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 TEX28O15482 410 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 RETP07949 1114 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 SHC2P98077 582 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 AP3B2Q13367 1082 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 LRRC71Q8N4P6 559 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 ZNF707Q96C28 371 aaPredicted RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 PARD6AQ9NPB6 346 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 PRMT8Q9NR22 394 aaPredicted RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 CNTNAP2Q9UHC6 1331 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 MYH9P35579 1960 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 C2CD2LO14523 706 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 RFPL2O75678 378 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 SREBF1P36956 1147 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 GLUD2P49448 558 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 SPEM2Q0P670 501 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 PLA2G4DQ86XP0 818 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 LPPQ93052 612 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
SH2D4A-202ENST00000518040 NRP1O14786 923 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 CYP21A2P08686 494 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 FSHRP23945 695 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 DNM2P50570 870 aa11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 SETQ01105 290 aaPredicted RBP11.1□□□□□ -0.63
SH2D4A-202ENST00000518040 CREMQ03060 361 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms