RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 HERC4Q5GLZ8 1057 aaPredicted RBP13.03□□□□□ -0.32
AP3B1-203ENST00000517940 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 CDR2LQ86X02 465 aaPredicted RBP13.03□□□□□ -0.32
AP3B1-203ENST00000517940 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 SMYD4Q8IYR2 804 aaPredicted RBP13.03□□□□□ -0.32
AP3B1-203ENST00000517940 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 TMEM199Q8N511 208 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 CPB2Q96IY4 423 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 INO80BQ9C086 356 aaPredicted RBP13.03□□□□□ -0.32
AP3B1-203ENST00000517940 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
AP3B1-203ENST00000517940 SEL1LQ9UBV2 794 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
AP3B1-203ENST00000517940 ANK1P16157 1881 aa13.02□□□□□ -0.32
AP3B1-203ENST00000517940 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
AP3B1-203ENST00000517940 M0QZ92 97 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 ACKR2O00590 384 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PIGRP01833 764 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PRKCBP05771 671 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PROZP22891 400 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 DEFB103AP81534 67 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PAK2Q13177 524 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PPIGQ13427 754 aaKnown RBP eCLIP13.02□□□□□ -0.337e-11■□□□□ 9
AP3B1-203ENST00000517940 KCNB1Q14721 858 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.02□□□□□ -0.33
AP3B1-203ENST00000517940 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
AP3B1-203ENST00000517940 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PDZD7Q9H5P4 517 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 SLC39A2Q9NP94 309 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 PRKAG2Q9UGJ0 569 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 TBX20Q9UMR3 447 aa13.02□□□□□ -0.33
AP3B1-203ENST00000517940 MEIS3P2A8K0S8 358 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 ANKRD63C9JTQ0 380 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 GOLGA6L22H0YM25 854 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 FAM189A1O60320 539 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 PARNO95453 639 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 ADSSP30520 456 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 BMT2Q1RMZ1 405 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 TMCO2Q7Z6W1 182 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 LRRC27Q9C0I9 530 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 C2orf40Q9H1Z8 148 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 RNF19AQ9NV58 838 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
AP3B1-203ENST00000517940 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
AP3B1-203ENST00000517940 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 PDCD11Q14690 1871 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 A0A1B0GUA9 196 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 C9IYK1 514 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 ENPP3O14638 875 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 GPR182O15218 404 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 TGFB1I1O43294 461 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 GCNT3O95395 438 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 MBD3O95983 291 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 SFPQP23246 707 aaKnown RBP eCLIP13□□□□□ -0.33
AP3B1-203ENST00000517940 EFNA5P52803 228 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 MORC3Q14149 939 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 SHHQ15465 462 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 MAPK6Q16659 721 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 ISM2Q6H9L7 571 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 ZNF598Q86UK7 904 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 ZBTB8OSQ8IWT0 167 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
AP3B1-203ENST00000517940 ZNF507Q8TCN5 953 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 HERVK_113Q902F9 699 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 SEPT8Q92599 483 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 GSDMAQ96QA5 445 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 MED15Q96RN5 788 aa13□□□□□ -0.33
AP3B1-203ENST00000517940 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms