RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SCG2P13521 617 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 SP100P23497 879 aaPredicted RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 CMA1P23946 247 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 U2AF2P26368 475 aaKnown RBP eCLIP8.28□□□□□ -1.081e-10■■■□□ 17.9
PVT1-206ENST00000517838 MARK3P27448 753 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 ID4P47928 161 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 MRPS6P82932 125 aaKnown RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 UBE3AQ05086 875 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 NR5A1Q13285 461 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 ANKRD54Q6NXT1 300 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 RBM43Q6ZSC3 357 aaKnown RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 FRMD5Q7Z6J6 570 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 ADSSL1Q8N142 457 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 SPC24Q8NBT2 197 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 NAP1L5Q96NT1 182 aaPredicted RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 USB1Q9BQ65 265 aaKnown RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 APOL5Q9BWW9 433 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 FTHL17Q9BXU8 183 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 TRIM5Q9C035 493 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 FAM49AQ9H0Q0 323 aaPredicted RBP8.28□□□□□ -1.08
PVT1-206ENST00000517838 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 CDH22Q9UJ99 828 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 SQORQ9Y6N5 450 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 MYH6P13533 1939 aa8.28□□□□□ -1.08
PVT1-206ENST00000517838 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 HIDE1A8MVS5 230 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 BIN1O00499 593 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 FGF18O76093 207 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ZNF202O95125 648 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ARP10275 920 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 INSRRP14616 1297 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 KCNA2P16389 499 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 NDUFV2P19404 249 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 TECP42680 631 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 IGBP1P78318 339 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 TMEM62Q0P6H9 643 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 GRM4Q14833 912 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 TTC38Q5R3I4 469 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 FAM102BQ5T8I3 360 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 IER5Q5VY09 327 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 PCNX4Q63HM2 1172 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 C11orf57Q6ZUT1 292 aaPredicted RBP8.27□□□□□ -1.09
PVT1-206ENST00000517838 HEATR3Q7Z4Q2 680 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 UBALD2Q8IYN6 164 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 AOPEPQ8N6M6 819 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 CNNM3Q8NE01 707 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ENGASEQ8NFI3 743 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 CCDC148Q8NFR7 591 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 RASGRP4Q8TDF6 673 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 SEPT1Q8WYJ6 367 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 NKD2Q969F2 451 aaPredicted RBP8.27□□□□□ -1.09
PVT1-206ENST00000517838 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ERAP1Q9NZ08 941 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
PVT1-206ENST00000517838 SORCS3Q9UPU3 1222 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 ZKSCAN5Q9Y2L8 839 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 IGSF9BQ9UPX0 1349 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 GVINP1Q7Z2Y8 2422 aa8.27□□□□□ -1.09
PVT1-206ENST00000517838 CCDC194A0A1B0GVG4 234 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 RRN3P2A6NIE6 340 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 C2CD4DB7Z1M9 353 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 MEIS2O14770 477 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 MGEA5O60502 916 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 HOXB8P17481 243 aaPredicted RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 ITGB5P18084 799 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 IBSPP21815 317 aaPredicted RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 SARSP49591 514 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 MMP16P51512 607 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 TROAPQ12815 778 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 TRAF1Q13077 416 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PAK2Q13177 524 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 SNW1Q13573 536 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 MTMR3Q13615 1198 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PTPAQ15257 358 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 TMEM266Q2M3C6 531 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 RESP18Q5W5W9 173 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 XRRA1Q6P2D8 792 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 SRBD1Q8N5C6 995 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 GIMAP8Q8ND71 665 aaPredicted RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 ERCC4Q92889 916 aaPredicted RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 GLG1Q92896 1179 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 CLIC6Q96NY7 704 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PCYT2Q99447 389 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 MAP3K14Q99558 947 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PHF20Q9BVI0 1012 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 CELF4Q9BZC1 486 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 TYW1Q9NV66 732 aaKnown RBP8.26□□□□□ -1.09
PVT1-206ENST00000517838 KCNH3Q9ULD8 1083 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 LRFN2Q9ULH4 789 aa8.26□□□□□ -1.09
PVT1-206ENST00000517838 PCDHB7Q9Y5E2 793 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms