RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 EIF2S3LQ2VIR3 472 aaKnown RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ZSCAN23Q3MJ62 389 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PEAR1Q5VY43 1037 aaPredicted RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 EGFLAMQ63HQ2 1017 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 MORC1Q86VD1 984 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 XYLT1Q86Y38 959 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ANKRD35Q8N283 1001 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 CLASRPQ8N2M8 674 aaKnown RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 CEP76Q8TAP6 659 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 LINC01599Q8WXQ3 324 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 KAT2BQ92831 832 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ZNF707Q96C28 371 aaPredicted RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PNMA5Q96PV4 448 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ALG1Q9BT22 464 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 SRCIN1Q9C0H9 1055 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 MAN1C1Q9NR34 630 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ARMCX1Q9P291 453 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ZNF214Q9UL59 606 aaPredicted RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 NEU2Q9Y3R4 380 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PCDHGB6Q9Y5F9 930 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 THADAQ6YHU6 1953 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 GON4LQ3T8J9 2241 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 ABCA7Q8IZY2 2146 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 ZFC3H1O60293 1989 aaKnown RBP3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 TNRC6BQ9UPQ9 1833 aaKnown RBP3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 ESYT2A0FGR8 921 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 ASB14A6NK59 587 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 WDR64B1ANS9 1081 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 B4E1Z4 1266 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 EFSO43281 561 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 TNFSF14O43557 240 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 LRG1P02750 347 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 CSF1RP07333 972 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 VSIG8P0DPA2 414 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 SKIP12755 728 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 CAPN3P20807 821 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 ITPKAP23677 461 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 IL4RP24394 825 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 PTGER4P35408 488 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 DPP6P42658 865 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 MCM2P49736 904 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 RALBP1Q15311 655 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 USP39Q53GS9 565 aaKnown RBP3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 HES3Q5TGS1 186 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 CLEC9AQ6UXN8 241 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 SERINC5Q86VE9 423 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 VSIG10LQ86VR7 867 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 TP53INP2Q8IXH6 220 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 PPM1NQ8N819 430 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 SGF29Q96ES7 293 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 POLR3GLQ9BT43 218 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 WDR11Q9BZH6 1224 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 TPSD1Q9BZJ3 242 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 BRD9Q9H8M2 597 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 PRDM8Q9NQV8 689 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 LRFN2Q9ULH4 789 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 RIPK3Q9Y572 518 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 NCANO14594 1321 aa3.89□□□□□ -1.79
SCARNA13-201ENST00000516672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 MYH2Q9UKX2 1941 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ANKRD18BA2A2Z9 1011 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 RTN2O75298 545 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ECI2O75521 394 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 DDX58O95786 925 aaKnown RBP3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 HEXAP06865 529 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 GHRP10912 638 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ITGB5P18084 799 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 KLRC2P26717 231 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 PRKAR2BP31323 418 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 PPM1AP35813 382 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 SOX9P48436 509 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 SLC4A3P48751 1232 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 DGKEP52429 567 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 GRM2Q14416 872 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 SGO2Q562F6 1265 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 LYSMD4Q5XG99 296 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 RSRC2Q7L4I2 434 aaKnown RBP3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 RTN4RL1Q86UN2 441 aaPredicted RBP3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 METTL16Q86W50 562 aaKnown RBP3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 DAGLBQ8NCG7 672 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 WDR66Q8TBY9 1149 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 FGF13Q92913 245 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 VCPIP1Q96JH7 1222 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 HSPA12BQ96MM6 686 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ZNF558Q96NG5 402 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 TRIM34Q9BYJ4 488 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ZBP1Q9H171 429 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 ADNPQ9H2P0 1102 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 SEMA6CQ9H3T2 930 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 VTA1Q9NP79 307 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 PI4KBQ9UBF8 816 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 IRAK3Q9Y616 596 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 WNK1Q9H4A3 2382 aa3.88□□□□□ -1.79
SCARNA13-201ENST00000516672 MAP1AP78559 2803 aaPredicted RBP3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 USP17L12C9JPN9 530 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 USP17L21D6R901 530 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 PRSS44E7EML9 344 aa3.87□□□□□ -1.79
SCARNA13-201ENST00000516672 VWA5AO00534 786 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms