RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GOLGA8JA6NMD2 632 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ARHGAP6O43182 974 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KPNA6O60684 536 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MYL3P08590 195 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ADSSP30520 456 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PHKA2P46019 1235 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KCNJ6P48051 423 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PSEN2P49810 448 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 VAMP7P51809 220 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CHMP4BP1P59074 171 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZBED6P86452 979 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MFSD10Q14728 455 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SNRNP35Q16560 246 aaKnown RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MAPK6Q16659 721 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CDCA2Q69YH5 1023 aaPredicted RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GBP6Q6ZN66 633 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 USP37Q86T82 979 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GPD1LQ8N335 351 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CD99L2Q8TCZ2 262 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NLRP4Q96MN2 994 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MAP7D2Q96T17 732 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KATNAL1Q9BW62 490 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NAA15Q9BXJ9 866 aaKnown RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EDEM3Q9BZQ6 932 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TTYH3Q9C0H2 523 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KIAA1586Q9HCI6 787 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FAM207AQ9NSI2 230 aaPredicted RBP8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ABHD10Q9NUJ1 306 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SRRDQ9UH36 339 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 AKT3Q9Y243 479 aa8.33□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NRCAMQ92823 1304 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GPR25O00155 361 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SEPT4O43236 478 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCP110O43303 1012 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EXTL3O43909 919 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MSCO60682 206 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 N4BP1O75113 896 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GNRH1P01148 92 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRKCBP05771 671 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ADRB2P07550 413 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GJB1P08034 283 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRIM49P0CI25 452 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRIM49CP0CI26 452 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RARBP10826 455 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FECHP22830 423 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FMO5P49326 533 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GJA9P57773 515 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PTENP60484 403 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 BEX3Q00994 111 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 POU5F1BQ06416 359 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CACNB2Q08289 660 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NOLC1Q14978 699 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ARHGEF6Q15052 776 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EXOC3L4Q17RC7 722 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CACNA2D4Q7Z3S7 1137 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CBWD2Q8IUF1 395 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMEM139Q8IV31 216 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 C17orf53Q8N3J3 647 aaPredicted RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LINC01465Q8N7H1 131 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KAT2BQ92831 832 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZBTB10Q96DT7 871 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SAAL1Q96ER3 474 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ERO1AQ96HE7 468 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DNAJC7Q99615 494 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CRACR2AQ9BSW2 395 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MSTO1Q9BUK6 570 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TARS2Q9BW92 718 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NFKBIZQ9BYH8 718 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SETD4Q9NVD3 440 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CEP72Q9P209 647 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 AGO2Q9UKV8 859 aaKnown RBP8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SCN10AQ9Y5Y9 1956 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 INO80B-WBP1J3KQ70 363 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HAS3O00219 553 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms