RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LRRC55Q6ZSA7 311 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
LINC01088-211ENST00000515597 ZZZ3Q8IYH5 903 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 EFHBQ8N7U6 833 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 PIK3C3Q8NEB9 887 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 PLAAQ9Y263 795 aa5.72□□□□□ -1.49
LINC01088-211ENST00000515597 GAS7O60861 476 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 SCAF4O95104 1147 aaKnown RBP5.71□□□□□ -1.5
LINC01088-211ENST00000515597 PCDH8O95206 1070 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 ABHD16AO95870 558 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 NEK4P51957 841 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 DALRD3Q5D0E6 543 aaKnown RBP5.71□□□□□ -1.5
LINC01088-211ENST00000515597 DCAF17Q5H9S7 520 aaPredicted RBP5.71□□□□□ -1.5
LINC01088-211ENST00000515597 KCNV1Q6PIU1 500 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 KIAA0907Q7Z7F0 614 aaPredicted RBP5.71□□□□□ -1.5
LINC01088-211ENST00000515597 NXPE1Q8N323 547 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 PPM1KQ8N3J5 372 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 OSBPL6Q9BZF3 934 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 ZNF768Q9H5H4 540 aaKnown RBP5.71□□□□□ -1.5
LINC01088-211ENST00000515597 FZD1Q9UP38 647 aa5.71□□□□□ -1.5
LINC01088-211ENST00000515597 GRID2IPA4D2P6 1211 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ZNF891A8MT65 544 aaPredicted RBP5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ENPP3O14638 875 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ALDH1A2O94788 518 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 FSBPO95073 299 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ITGB1P05556 798 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ADRA1BP35368 520 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 LRRC32Q14392 662 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 LY6G5CQ5SRR4 150 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 HIST1H2AHQ96KK5 128 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 HIST1H2AJQ99878 128 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 CPPED1Q9BRF8 314 aaPredicted RBP5.7□□□□□ -1.5
LINC01088-211ENST00000515597 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
LINC01088-211ENST00000515597 CPEB1Q9BZB8 566 aaKnown RBP5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ENKD1Q9H0I2 346 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 EPC1Q9H2F5 836 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 IFT57Q9NWB7 429 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 HS3ST4Q9Y661 456 aa5.7□□□□□ -1.5
LINC01088-211ENST00000515597 ELL2O00472 640 aaPredicted RBP5.69□□□□□ -1.5
LINC01088-211ENST00000515597 HOXA3O43365 443 aaPredicted RBP5.69□□□□□ -1.5
LINC01088-211ENST00000515597 NUDT3O95989 172 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 CD40P25942 277 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 CASRP41180 1078 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 PTPAQ15257 358 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 PCBP1Q15365 356 aaKnown RBP eCLIP5.69□□□□□ -1.5
LINC01088-211ENST00000515597 MAN2A1Q16706 1144 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 CNNM4Q6P4Q7 775 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 DHX37Q8IY37 1157 aaKnown RBP5.69□□□□□ -1.5
LINC01088-211ENST00000515597 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 CHTF18Q8WVB6 975 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
LINC01088-211ENST00000515597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.69□□□□□ -1.52e-7■■□□□ 11.9
LINC01088-211ENST00000515597 EIF2B4Q9UI10 523 aaKnown RBP5.69□□□□□ -1.5
LINC01088-211ENST00000515597 NRP1O14786 923 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 TRIM24O15164 1050 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 MAFGO15525 162 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 TGM5O43548 720 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 LMNAP02545 664 aaKnown RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 GYPEP15421 78 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 CD69Q07108 199 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 SEPT7Q16181 437 aaKnown RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 TIGD2Q4W5G0 525 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 ZBTB41Q5SVQ8 909 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 GPR158Q5T848 1215 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 NOP9Q86U38 636 aaKnown RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 PASD1Q8IV76 773 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 UNC5BQ8IZJ1 945 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 SMC1BQ8NDV3 1235 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 BEND2Q8NDZ0 799 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 OR52N2Q8NGI0 321 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 OR5M3Q8NGP4 307 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 FAM193BQ96PV7 902 aaPredicted RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 THG1LQ9NWX6 298 aaKnown RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 USP36Q9P275 1121 aaKnown RBP5.68□□□□□ -1.5
LINC01088-211ENST00000515597 PCDHB6Q9Y5E3 794 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 MYPNQ86TC9 1320 aa5.68□□□□□ -1.5
LINC01088-211ENST00000515597 AHRRA9YTQ3 701 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 LPXNO60711 386 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 RECQL4O94761 1208 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 APOBEC3AP31941 199 aaPredicted RBP5.67□□□□□ -1.5
LINC01088-211ENST00000515597 KPNA1P52294 538 aaPredicted RBP5.67□□□□□ -1.5
LINC01088-211ENST00000515597 FAM189BP81408 668 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 HECTD2Q5U5R9 776 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 PPP1R14CQ8TAE6 165 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 FDXACB1Q9BRP7 624 aaPredicted RBP5.67□□□□□ -1.5
LINC01088-211ENST00000515597 LSM14BQ9BX40 385 aaKnown RBP5.67□□□□□ -1.5
LINC01088-211ENST00000515597 PACSIN3Q9UKS6 424 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 USP18Q9UMW8 372 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 TBX22Q9Y458 520 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 TNFRSF18Q9Y5U5 241 aa5.67□□□□□ -1.5
LINC01088-211ENST00000515597 CENPVL1A0A0U1RR11 272 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 LCHNA4D1U4 455 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 GSG1L2A8MUP6 293 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 DNAJC6O75061 913 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 RHOBTB3O94955 611 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 LY86O95711 162 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 SCNN1BP51168 640 aa5.66□□□□□ -1.5
LINC01088-211ENST00000515597 PHC1P78364 1004 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms