RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 SRGAP2BP0DMP2 458 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 RCAN1P53805 252 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 EXOSC10Q01780 885 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 COASYQ13057 564 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 PFKFB3Q16875 520 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 KIZQ2M2Z5 673 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 BMP2KLQ5H9B9 411 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 HFE2Q6ZVN8 426 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 TRMT1LQ7Z2T5 733 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZBTB33Q86T24 672 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 SMAP1Q8IYB5 467 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 KIAA0319LQ8IZA0 1049 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 REXO1Q8N1G1 1221 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 TMEM40Q8WWA1 233 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 PPP1R16BQ96T49 567 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 OSMRQ99650 979 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 ATP6V0A4Q9HBG4 840 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 C6orf50Q9HD87 102 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 TBC1D22BQ9NU19 505 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 CLEC1BQ9P126 229 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 BARX2Q9UMQ3 279 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 SAMM50Q9Y512 469 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 CACNA1HO95180 2353 aa10.07□□□□□ -0.8
CDC42SE2-212ENST00000515533 IGLV3-22A0A075B6J6 115 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 C9IYK1 514 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 FGF18O76093 207 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 GLP2RO95838 553 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 VTNP04004 478 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 PSAPP07602 524 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 CYP3A4P08684 503 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 LAG3P18627 525 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 TMOD1P28289 359 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 GNA11P29992 359 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 CDC27P30260 824 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 CRYBB1P53674 252 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 NHLH1Q02575 133 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 GAS6Q14393 721 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 ADCK5Q3MIX3 580 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZNF746Q6NUN9 644 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 ABI1Q8IZP0 508 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 COLGALT1Q8NBJ5 622 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 EDAQ92838 391 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 FAM167AQ96KS9 214 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 FBXL18Q96ME1 805 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 CDCA3Q99618 268 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 TMEM161AQ9NX61 479 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 AKT3Q9Y243 479 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 USP15Q9Y4E8 981 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 PCDHA10Q9Y5I2 948 aa10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 MAFBQ9Y5Q3 323 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-212ENST00000515533 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ESYT2A0FGR8 921 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZBTB42B2RXF5 422 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 LOC730098B7Z3J9 87 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 PER2O15055 1255 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 MAGEB2O15479 319 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 C22orf31O95567 290 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 FGFR1P11362 822 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZSCAN20P17040 1043 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ADD1P35611 737 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 MRE11P49959 708 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 PRR16Q569H4 304 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 SUGP1Q8IWZ8 645 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 BICD2Q8TD16 824 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 SCLT1Q96NL6 688 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 PHF7Q9BWX1 381 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ZMYND12Q9H0C1 365 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ELAC1Q9H777 363 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 TYW1Q9NV66 732 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 CUEDC1Q9NWM3 386 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 GABBR1Q9UBS5 961 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 MYO15AQ9UKN7 3530 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 C2orf16Q68DN1 1984 aa10.05□□□□□ -0.8
CDC42SE2-212ENST00000515533 TMEM221A6NGB7 291 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 WDR64B1ANS9 1081 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 M0R296 226 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 CDC45O75419 566 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 ATP4AP20648 1035 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 PPM1AP35813 382 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 CLCN3P51790 818 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 NLRP11P59045 1033 aaKnown RBP10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 ERVFC1P60507 584 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 KRT17Q04695 432 aa10.04□□□□□ -0.8
CDC42SE2-212ENST00000515533 APOBRQ0VD83 1088 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms