RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 FAM187BQ17R55 369 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 PAN2Q504Q3 1202 aaKnown RBP28.62■■■□□ 2.17
DDR1-279ENST00000515529 CRIPAKQ8N1N5 446 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 MYCT1Q8N699 235 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 TGS1Q96RS0 853 aaKnown RBP28.62■■■□□ 2.17
DDR1-279ENST00000515529 TRIM6Q9C030 488 aaPredicted RBP28.62■■■□□ 2.17
DDR1-279ENST00000515529 LRRC27Q9C0I9 530 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 FZD8Q9H461 694 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 PARVGQ9HBI0 331 aa28.62■■■□□ 2.17
DDR1-279ENST00000515529 LAMA2P24043 3122 aaKnown RBP28.62■■■□□ 2.17
DDR1-279ENST00000515529 TBKBP1A7MCY6 615 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 H0YCG3 227 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 B4GALT5O43286 388 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 GIT2Q14161 759 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 ADALQ6DHV7 355 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 DYMQ7RTS9 669 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 CMTR2Q8IYT2 770 aaKnown RBP28.61■■■□□ 2.17
DDR1-279ENST00000515529 SPIRE2Q8WWL2 714 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 ZNF689Q96CS4 500 aaPredicted RBP28.61■■■□□ 2.17
DDR1-279ENST00000515529 PGBD4Q96DM1 585 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 CERS4Q9HA82 394 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 PCDHB2Q9Y5E7 798 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 CNTNAP2Q9UHC6 1331 aa28.61■■■□□ 2.17
DDR1-279ENST00000515529 ACKR2O00590 384 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 SLC16A4O15374 487 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 FGFR1P11362 822 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 CNNM3Q8NE01 707 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 ARNTL2Q8WYA1 636 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 DDX12PQ92771 950 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 CCDC113Q9H0I3 377 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 MTMR10Q9NXD2 777 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 MTUS1Q9ULD2 1270 aa28.6■■■□□ 2.17
DDR1-279ENST00000515529 N4BP3O15049 544 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 POLR2DO15514 142 aaKnown RBP28.59■■■□□ 2.17
DDR1-279ENST00000515529 ARHGEF15O94989 841 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 GATMP50440 423 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 AMPD3Q01432 767 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 STRN3Q13033 797 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 GRIN2CQ14957 1233 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 TPRNQ4KMQ1 711 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 SLC27A1Q6PCB7 646 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 HACE1Q8IYU2 909 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 SAMD11Q96NU1 681 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 ADPGKQ9BRR6 497 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 TMEM117Q9H0C3 514 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 TMEM134Q9H6X4 195 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 RC3H2Q9HBD1 1191 aaKnown RBP28.59■■■□□ 2.17
DDR1-279ENST00000515529 GDPD2Q9HCC8 539 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 ARHGAP28Q9P2N2 729 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 KCNH3Q9ULD8 1083 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 RWDD3Q9Y3V2 267 aa28.59■■■□□ 2.17
DDR1-279ENST00000515529 ZNF623O75123 536 aa28.58■■■□□ 2.17
DDR1-279ENST00000515529 CMA1P23946 247 aa28.58■■■□□ 2.17
DDR1-279ENST00000515529 APBB1IPQ7Z5R6 666 aaPredicted RBP28.58■■■□□ 2.17
DDR1-279ENST00000515529 ZNF598Q86UK7 904 aaKnown RBP28.58■■■□□ 2.17
DDR1-279ENST00000515529 NTPCRQ9BSD7 190 aaKnown RBP28.58■■■□□ 2.17
DDR1-279ENST00000515529 TNMDQ9H2S6 317 aa28.58■■■□□ 2.17
DDR1-279ENST00000515529 MAGEF1Q9HAY2 307 aa28.58■■■□□ 2.17
DDR1-279ENST00000515529 CHMP5Q9NZZ3 219 aa28.58■■■□□ 2.17
DDR1-279ENST00000515529 A0A1B0GUA9 196 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 GOLGA6L4A6NEF3 574 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 MYMKA6NI61 221 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 ZNF131P52739 623 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 ERVK-21P61565 698 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 E2F4Q16254 413 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 LONRF3Q496Y0 759 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 UBXN11Q5T124 520 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 SPOUT1Q5T280 376 aaKnown RBP28.57■■■□□ 2.16
DDR1-279ENST00000515529 CEP57L1Q8IYX8 460 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 GAS2L1Q99501 681 aaPredicted RBP28.57■■■□□ 2.16
DDR1-279ENST00000515529 EIF2AQ9BY44 585 aaKnown RBP28.57■■■□□ 2.16
DDR1-279ENST00000515529 PRDM12Q9H4Q4 367 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 COL4A6Q14031 1691 aa28.57■■■□□ 2.16
DDR1-279ENST00000515529 K7ENM7 598 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 TRAK2O60296 914 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 NPTXRO95502 500 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 IDEP14735 1019 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 ATF7P17544 494 aaPredicted RBP28.56■■■□□ 2.16
DDR1-279ENST00000515529 SCP2P22307 547 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 MYH11P35749 1972 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 GLB1LQ6UWU2 654 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 CDR2LQ86X02 465 aaPredicted RBP28.56■■■□□ 2.16
DDR1-279ENST00000515529 FAM178BQ8IXR5 827 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 SLC17A8Q8NDX2 589 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 TMEM161BQ8NDZ6 487 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 HELQQ8TDG4 1101 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 LPPQ93052 612 aa28.56■■■□□ 2.16
DDR1-279ENST00000515529 CDX2Q99626 313 aaPredicted RBP28.56■■■□□ 2.16
DDR1-279ENST00000515529 MRPL4Q9BYD3 311 aaKnown RBP28.56■■■□□ 2.16
DDR1-279ENST00000515529 ITGA4P13612 1032 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 CTNNB1P35222 781 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 ATF7IP2Q5U623 682 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 TMEM192Q8IY95 271 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 FBXO22Q8NEZ5 403 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 RSPH1Q8WYR4 309 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 C17orf80Q9BSJ5 609 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 PDZD7Q9H5P4 517 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 IPPQ9Y573 584 aa28.55■■■□□ 2.16
DDR1-279ENST00000515529 MRPL42Q9Y6G3 142 aaKnown RBP28.55■■■□□ 2.16
DDR1-279ENST00000515529 A0A1B0GVL5 298 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms