RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-210	ENST00000515266	GOLGA8A	A7E2F4	631 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266		K7ESF4	209 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	MATN3	O15232	486 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	SCAND1	P57086	179 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	ERVK-21	P61565	698 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	SPIDR	Q14159	915 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	RNF219	Q5W0B1	726 aa	Predicted RBP	4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	LMBR1L	Q6UX01	489 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	DBX2	Q6ZNG2	339 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	SPRED1	Q7Z699	444 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	TSPEAR	Q8WU66	669 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	TGFBRAP1	Q8WUH2	860 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	BORCS6	Q96GS4	357 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	AHCYL2	Q96HN2	611 aa	Known RBP	4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	RAX2	Q96IS3	184 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	NCDN	Q9UBB6	729 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	DPP7	Q9UHL4	492 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	MCM8	Q9UJA3	840 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	RCAN3	Q9UKA8	241 aa		4.99	□□□□□ -1.61
MBD4-210	ENST00000515266	STC2	O76061	302 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	CFB	P00751	764 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	LTA4H	P09960	611 aa	Known RBP	4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	TNFRSF1A	P19438	455 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	GPR3	P46089	330 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	MRPS9	P82933	396 aa	Known RBP	4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	FAP	Q12884	760 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.98	□□□□□ -1.61	5e-6	■■■□□ 18.6
MBD4-210	ENST00000515266	UBE3C	Q15386	1083 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	KCNK18	Q7Z418	384 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	KRTAP4-2	Q9BYR5	136 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	QRSL1	Q9H0R6	528 aa	Known RBP	4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	ATP8A1	Q9Y2Q0	1164 aa		4.98	□□□□□ -1.61
MBD4-210	ENST00000515266	CAPN14	A8MX76	684 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	NRP1	O14786	923 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	PLSCR1	O15162	318 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	ACRV1	P26436	265 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	CASR	P41180	1078 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	CDKN1C	P49918	316 aa	Predicted RBP	4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	NPEPPS	P55786	919 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	WNT3A	P56704	352 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	AMPD3	Q01432	767 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	MEF2A	Q02078	507 aa	Predicted RBP	4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	HHEX	Q03014	270 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	MUM1	Q2TAK8	710 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	FAM214A	Q32MH5	1076 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	FKBP15	Q5T1M5	1219 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	ABHD15	Q6UXT9	468 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	NECAB2	Q7Z6G3	386 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	SGMS1	Q86VZ5	419 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	ZNF512	Q96ME7	567 aa	Predicted RBP	4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	TRIM8	Q9BZR9	551 aa		4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.97	□□□□□ -1.61
MBD4-210	ENST00000515266	KRTAP23-1	A1A580	65 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	PRAMEF4	O60810	478 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	CTSS	P25774	331 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	HIBADH	P31937	336 aa	Known RBP	4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	CDK17	Q00537	523 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	SRSF2	Q01130	221 aa	Known RBP	4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	ELAVL1	Q15717	326 aa	Known RBP	4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	C19orf54	Q5BKX5	351 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	TOR2A	Q5JU69	321 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	RNF207	Q6ZRF8	634 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	ANKRD35	Q8N283	1001 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	SNX33	Q8WV41	574 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	AUTS2	Q8WXX7	1259 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	EXTL1	Q92935	676 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	ARL8A	Q96BM9	186 aa		4.96	□□□□□ -1.62
MBD4-210	ENST00000515266	CYP27B1	O15528	508 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	MTNR1B	P49286	362 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	CCT2	P78371	535 aa	Known RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	DUSP2	Q05923	314 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	KLF1	Q13351	362 aa	Predicted RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	MRPL49	Q13405	166 aa	Known RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	ADRM1	Q16186	407 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	USP39	Q53GS9	565 aa	Known RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	MFSD5	Q6N075	450 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	BTNL9	Q6UXG8	535 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266		Q6ZRM9	215 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	CBARP	Q8N350	705 aa	Predicted RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	CNTD1	Q8N815	330 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	IL17D	Q8TAD2	202 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	MIEF2	Q96C03	454 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	PAWR	Q96IZ0	340 aa	Known RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	MENT	Q9BUN1	341 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	KRTAP17-1	Q9BYP8	105 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	PUS7L	Q9H0K6	701 aa	Known RBP	4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	IFT122	Q9HBG6	1241 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	SLC5A4	Q9NY91	659 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	SCOC	Q9UIL1	159 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	GIT1	Q9Y2X7	761 aa		4.95	□□□□□ -1.62
MBD4-210	ENST00000515266	HOXA3	O43365	443 aa	Predicted RBP	4.94	□□□□□ -1.62
MBD4-210	ENST00000515266	MTHFD2	P13995	350 aa		4.94	□□□□□ -1.62
MBD4-210	ENST00000515266	GYPE	P15421	78 aa		4.94	□□□□□ -1.62
MBD4-210	ENST00000515266	CDK11B	P21127	795 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms