RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CCR3P51677 355 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 CLCN3P51790 818 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 SATB1Q01826 763 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 IFIT1BQ5T764 474 aaKnown RBP13.46□□□□□ -0.25
SMAD5-210ENST00000515005 GLB1LQ6UWU2 654 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 GRASPQ7Z6J2 395 aaPredicted RBP13.46□□□□□ -0.25
SMAD5-210ENST00000515005 HDAC7Q8WUI4 952 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 SCNM1Q9BWG6 230 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
SMAD5-210ENST00000515005 LAMA1P25391 3075 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 MYH9P35579 1960 aaKnown RBP13.45□□□□□ -0.26
SMAD5-210ENST00000515005 IGKV6D-21A0A0A0MT36 114 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 ZNF213O14771 459 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 BACH1O14867 736 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 TGM5O43548 720 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 DDHD2O94830 711 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 ATP4AP20648 1035 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 PHKA2P46019 1235 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 GRM4Q14833 912 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 SMOC1Q9H4F8 434 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 AKT3Q9Y243 479 aa13.45□□□□□ -0.26
SMAD5-210ENST00000515005 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 CSDE1O75534 798 aaKnown RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 DARSP14868 501 aaKnown RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 CNR2P34972 360 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 CXCL12P48061 93 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 ITGB3BPQ13352 177 aaPredicted RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 SEC23AQ15436 765 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 C19orf48Q6RUI8 117 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 CEP68Q76N32 757 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 TRMT1LQ7Z2T5 733 aaKnown RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 PDZD3Q86UT5 571 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 GLYCTKQ8IVS8 523 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 CCDC60Q8IWA6 550 aaPredicted RBP13.44□□□□□ -0.26
SMAD5-210ENST00000515005 ITFG1Q8TB96 612 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 RSPH1Q8WYR4 309 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 UBAC1Q9BSL1 405 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 HERC2P3Q9BVR0 1158 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 PLA2G2FQ9BZM2 168 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 SSX2IPQ9Y2D8 614 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 FAN1Q9Y2M0 1017 aa13.44□□□□□ -0.26
SMAD5-210ENST00000515005 LAMA5O15230 3695 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 NFASCO94856 1347 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 ASXL3Q9C0F0 2248 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 NRP1O14786 923 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 ZMYND10O75800 440 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 CCNE2O96020 404 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 ALDH2P05091 517 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 GLUD2P49448 558 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 NT5C2P49902 561 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
SMAD5-210ENST00000515005 GAS6Q14393 721 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 LILRA6Q6PI73 481 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
SMAD5-210ENST00000515005 IER2Q9BTL4 223 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 MARCH5Q9NX47 278 aa13.43□□□□□ -0.26
SMAD5-210ENST00000515005 HOXC13P31276 330 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
SMAD5-210ENST00000515005 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 EFCAB12Q6NXP0 572 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
SMAD5-210ENST00000515005 LRRC71Q8N4P6 559 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 MAP7D2Q96T17 732 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
SMAD5-210ENST00000515005 K7ESF4 209 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
SMAD5-210ENST00000515005 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 MS4A1P11836 297 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 GPC3P51654 580 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 DSG1Q02413 1049 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 UBE2SQ16763 222 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 TWF2Q6IBS0 349 aaKnown RBP13.41□□□□□ -0.26
SMAD5-210ENST00000515005 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 B3GALT6Q96L58 329 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 CHST12Q9NRB3 414 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
SMAD5-210ENST00000515005 PRG3Q9Y2Y8 225 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms