RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ANO10Q9NW15 660 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 CAVIN2O95810 425 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TIMP1P01033 207 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 CXCL10P02778 98 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 CCDC192P0DO97 292 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 MYBP10242 640 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 HOXD13P35453 343 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 PRCPP42785 496 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 ZNF445P59923 1031 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 STRN3Q13033 797 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 STIM1Q13586 685 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 STX1AQ16623 288 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 NFIL3Q16649 462 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TSHZ1Q6ZSZ6 1077 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TMEM40Q8WWA1 233 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 DHTKD1Q96HY7 919 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 OSMRQ99650 979 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TMEM39AQ9NV64 488 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 ZMYM2Q9UBW7 1377 aa13.16□□□□□ -0.3
PDLIM5-220ENST00000514830 SYCE3A1L190 88 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 BIN1O00499 593 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 PDXKO00764 312 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 GPR182O15218 404 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 PRKCBP05771 671 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 TYRO3Q06418 890 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 MYBPC2Q14324 1141 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 LPIN1Q14693 890 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 MBTPS1Q14703 1052 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 ZCWPW2Q504Y3 356 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 C12orf56Q8IXR9 622 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 CCDC51Q96ER9 411 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 SCLT1Q96NL6 688 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 ERVK-5Q9HDB9 667 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 TRAF3IP3Q9Y228 551 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 STYXL1Q9Y6J8 313 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
PDLIM5-220ENST00000514830 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 PSMA7O14818 248 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 KIAA0391O15091 583 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 TSPAN1O60635 241 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 CTSHP09668 335 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 PROZP22891 400 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 CCNE1P24864 410 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 LRRC63Q05C16 580 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 GPNMBQ14956 572 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 EDRF1Q3B7T1 1238 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 DPCR1Q3MIW9 517 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 FAM228AQ86W67 206 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 SLC9A9Q8IVB4 645 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 TYW1Q9NV66 732 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 TNFSF13BQ9Y275 285 aa13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-220ENST00000514830 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 NBNO60934 754 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 TOM1L1O75674 476 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 ERLIN2O94905 339 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 EDN1P05305 212 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 PFKMP08237 780 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 GARTP22102 1010 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 KCNA1Q09470 495 aa13.13□□□□□ -0.31
PDLIM5-220ENST00000514830 PLEKHG4Q58EX7 1191 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms