RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 C8orf48Q96LL4 319 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 FGD4Q96M96 766 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TTYH3Q9C0H2 523 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 GLT8D2Q9H1C3 349 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 ACTR5Q9H9F9 607 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 PFDN4Q9NQP4 134 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 KIAA1257Q9ULG3 409 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TTF2Q9UNY4 1162 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 REXO2Q9Y3B8 237 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 TSC22D4Q9Y3Q8 395 aa8.04□□□□□ -1.12
PDLIM5-219ENST00000514743 KIF13BQ9NQT8 1826 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 LGALS16A8MUM7 142 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 MAP3K13O43283 966 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 DDX5P17844 614 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 EEF1GP26641 437 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 FXR2P51116 673 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 NFIAQ12857 509 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TMEM151BQ8IW70 566 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 MB21D1Q8N884 522 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 AKT1S1Q96B36 256 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 MTMR8Q96EF0 704 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 DMAP1Q9NPF5 467 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 STK39Q9UEW8 545 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 CIDEBQ9UHD4 219 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 SMCHD1A6NHR9 2005 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 OPLAHO14841 1288 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 HNRNPRO43390 633 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TTLL1O95922 423 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 SCNN1DP51172 638 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 RASSF7Q02833 373 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 CYP4A11Q02928 519 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 PRKG1Q13976 671 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TRIM14Q14142 442 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TTLL12Q14166 644 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 KCTD2Q14681 263 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TMTC4Q5T4D3 741 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 C6orf183Q5T699 404 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 KCTD16Q68DU8 428 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 YTHDF3Q7Z739 585 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 COL23A1Q86Y22 540 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 ADGRF4Q8IZF3 695 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 WDR60Q8WVS4 1066 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 QTRT2Q9H974 415 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 KCNQ5Q9NR82 932 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 SERPINB13Q9UIV8 391 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 ZNF148Q9UQR1 794 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 ASB3Q9Y575 518 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 PCDHAC2Q9Y5I4 1007 aa8.03□□□□□ -1.12
PDLIM5-219ENST00000514743 A0A1W2PQC6 194 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 TTC26A0AVF1 554 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 SPTLC1O15269 473 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 DIAPH2O60879 1101 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 ATP6V1G2O95670 118 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 GSTT2P0CG29 244 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 GSTT2BP0CG30 244 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 UBXN1Q04323 297 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 TNIP1Q15025 636 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 MIIPQ5JXC2 388 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 ANKRD40Q6AI12 368 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 WDR59Q6PJI9 974 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 MSANTD4Q8NCY6 345 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 FLCNQ8NFG4 579 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 CASP10Q92851 521 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 DNAJC7Q99615 494 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 CHP1Q99653 195 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 NUDT12Q9BQG2 462 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 SIKE1Q9BRV8 207 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 USP40Q9NVE5 1235 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 KIAA1522Q9P206 1035 aaPredicted RBP8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 GTF3C4Q9UKN8 822 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 HEY1Q9Y5J3 304 aa8.02□□□□□ -1.12
PDLIM5-219ENST00000514743 A0A1W2PQ67 120 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 POTEMA6NI47 508 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 NPR1P16066 1061 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 CCNE1P24864 410 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 ADCY7P51828 1080 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PPFIA1Q13136 1202 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PAK2Q13177 524 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 DRP2Q13474 957 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 BOLA3Q53S33 107 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 TMTC1Q8IUR5 882 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 P2RX5Q93086 422 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 RPS6KC1Q96S38 1066 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 RIC8AQ9NPQ8 531 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 MYMKA6NI61 221 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 PSMA7O14818 248 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 USO1O60763 962 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 DNAJC8O75937 253 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 FBXO21O94952 628 aa8.02□□□□□ -1.13
PDLIM5-219ENST00000514743 UBL4AP11441 157 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms