RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RIN2Q8WYP3 895 aaPredicted RBP6.79□□□□□ -1.32
HMGCS1-207ENST00000514610 COA7Q96BR5 231 aa6.79□□□□□ -1.32
HMGCS1-207ENST00000514610 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 CT47B1P0C2W7 299 aaPredicted RBP6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 EDNRBP24530 442 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 GJA9P57773 515 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 ADAM8P78325 824 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 ATP2C1P98194 919 aaPredicted RBP6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 TCIRG1Q13488 830 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 ZMAT1Q5H9K5 638 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 TAS1R1Q7RTX1 841 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 PLA2G15Q8NCC3 412 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 CFHR4Q92496 578 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 DPF2Q92785 391 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 HOXB13Q92826 284 aaPredicted RBP6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 UIMC1Q96RL1 719 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 ING3Q9NXR8 418 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 ZBTB21Q9ULJ3 1066 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 PNMA8BQ9ULN7 279 aaPredicted RBP6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 LIMCH1Q9UPQ0 1083 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 DNM3Q9UQ16 869 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 SLC4A7Q9Y6M7 1214 aa6.78□□□□□ -1.32
HMGCS1-207ENST00000514610 MATN2O00339 956 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 ARHGAP6O43182 974 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 PRAMEF4O60810 478 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 ALDH1A2O94788 518 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 GSPT1P15170 499 aaKnown RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 WASP42768 502 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 FXR1P51114 621 aaKnown RBP eCLIP6.77□□□□□ -1.333e-8■■□□□ 13
HMGCS1-207ENST00000514610 ADCY7P51828 1080 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 MEF2AQ02078 507 aaPredicted RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 NFYCQ13952 458 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 SEPT2Q15019 361 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 UAP1L1Q3KQV9 507 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 RRP12Q5JTH9 1297 aaKnown RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 TCEAL8Q8IYN2 117 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 GPR156Q8NFN8 814 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 SNX33Q8WV41 574 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 ADI1Q9BV57 179 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 RBM12Q9NTZ6 932 aaKnown RBP6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 IPPQ9Y573 584 aa6.77□□□□□ -1.33
HMGCS1-207ENST00000514610 DAPK3O43293 454 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 HTRA2O43464 458 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 B4GALT4O60513 344 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 TOX4O94842 621 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 LPOP22079 712 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 KIAA2012Q0VF49 1180 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 MGAT2Q10469 447 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 C3orf36Q3SXR2 165 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 NXNQ6DKJ4 435 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 Q6ZVL8 140 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 EPM2AIP1Q7L775 607 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 CATIPQ7Z7H3 387 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 C14orf80Q86SX3 495 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 WDR75Q8IWA0 830 aaKnown RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 MYO1HQ8N1T3 1032 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 LILRA3Q8N6C8 439 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 MAGEB6Q8N7X4 407 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 MARCH10Q8NA82 808 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 GCDHQ92947 438 aaPredicted RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 CSRNP2Q9H175 543 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 C14orf93Q9H972 538 aaKnown RBP6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 ANLNQ9NQW6 1124 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 TLR9Q9NR96 1032 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 DUSP10Q9Y6W6 482 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 RPTORQ8N122 1335 aa6.76□□□□□ -1.33
HMGCS1-207ENST00000514610 CCDC154A6NI56 674 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 AKR1B10O60218 316 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 ZSCAN22P10073 491 aaPredicted RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 ADSLP30566 484 aaPredicted RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 KIR2DL3P43628 341 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 BPIFB4P59827 614 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 MLC1Q15049 377 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 NOMO1Q15155 1222 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 MST1LQ2TV78 715 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 C19orf54Q5BKX5 351 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 CXorf57Q6NSI4 855 aaKnown RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 MIER2Q8N344 545 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 ZSCAN18Q8TBC5 510 aaPredicted RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 FEZF2Q8TBJ5 459 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 LPPQ93052 612 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 PAWRQ96IZ0 340 aaKnown RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 KCNC2Q96PR1 638 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC12A5Q9H2X9 1139 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 INTUQ9ULD6 942 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 NR2E1Q9Y466 385 aa6.75□□□□□ -1.33
HMGCS1-207ENST00000514610 POU2F2P09086 479 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 VSIG10L2P0DP72 767 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 BMP7P18075 431 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 CYP2C19P33261 490 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC16A1P53985 500 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms