RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 TTC21AQ8NDW8 1320 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 VWA3AA6NCI4 1184 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SLC7A4O43246 635 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 IDH1O75874 414 aaKnown RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 CD4P01730 458 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 ACCSLQ4AC99 568 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 PPP1R12CQ9BZL4 782 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SENP1Q9P0U3 644 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF148Q9UQR1 794 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 FAM32AQ9Y421 112 aaKnown RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 GPR75-ASB3A0A0A6YYF3 556 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 FAM170AA1A519 330 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 FAM155AB1AL88 458 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 LIN7AO14910 233 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 CBFA2T3O75081 653 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SEC24BO95487 1268 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 PMLP29590 882 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 OR1G1P47890 313 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SULT1E1P49888 294 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 THOP1P52888 689 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 EIF4G2P78344 907 aaKnown RBP eCLIP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SKIDA1Q1XH10 827 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SLC9B2Q86UD5 537 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 SCYL3Q8IZE3 742 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 OR52K2Q8NGK3 314 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 MAGEC3Q8TD91 643 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 HDAC11Q96DB2 347 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 AIFM2Q9BRQ8 373 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 CCDC113Q9H0I3 377 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 CENPHQ9H3R5 247 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 EHD1Q9H4M9 534 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
NIPBL-208ENST00000514335 EURLQ9NYK6 297 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 ZBTB21Q9ULJ3 1066 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 PCDHGB5Q9Y5G0 923 aa7.76□□□□□ -1.17
NIPBL-208ENST00000514335 H0Y626 953 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SOCS5O75159 536 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 RFC4P35249 363 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 DAB2P98082 770 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 NDUFAF5Q5TEU4 345 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SHCBP1Q8NEM2 672 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 WDR60Q8WVS4 1066 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 BHMT2Q9H2M3 363 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 DCTPP1Q9H773 170 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 LY9Q9HBG7 655 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 VPS45Q9NRW7 570 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 GMIPQ9P107 970 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CIDEBQ9UHD4 219 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ZMYND8Q9ULU4 1186 aaPredicted RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CD2APQ9Y5K6 639 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 THSD7BQ9C0I4 1608 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PXDNLA1KZ92 1463 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 H3BQF6 201 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PLOD3O60568 738 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PPP1R37O75864 691 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 USP1O94782 785 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CYP3A4P08684 503 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 WEE2P0C1S8 567 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PYGMP11217 842 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ALADP13716 330 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ALOX12P18054 663 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 AXLP30530 894 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CRKP46108 304 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 RPIAP49247 311 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 GTF2A2P52657 109 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SMARCB1Q12824 385 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CUL1Q13616 776 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CCINQ13939 588 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 MORC3Q14149 939 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 NR1D2Q14995 579 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 STILQ15468 1287 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ARL13BQ3SXY8 428 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 MZT2BQ6NZ67 158 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 XRRA1Q6P2D8 792 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 OLFM4Q6UX06 510 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ZNF354CQ86Y25 554 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TMTC1Q8IUR5 882 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 HACE1Q8IYU2 909 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 NSMCE1Q8WV22 266 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 RAPGEF5Q92565 580 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TTC17Q96AE7 1141 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 VCPIP1Q96JH7 1222 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PPP1R36Q96LQ0 422 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TSNARE1Q96NA8 513 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 TSG101Q99816 390 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 KCNF1Q9H3M0 494 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SLITRK6Q9H5Y7 841 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 C8orf33Q9H7E9 229 aaPredicted RBP7.75□□□□□ -1.17
NIPBL-208ENST00000514335 MVB12BQ9H7P6 319 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 FANCEQ9HB96 536 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 PARVBQ9HBI1 364 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 L3MBTL1Q9Y468 752 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ATP6V1DQ9Y5K8 247 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 ADCY9O60503 1353 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 CAPN8A6NHC0 703 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
NIPBL-208ENST00000514335 INO80B-WBP1J3KQ70 363 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms