RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TRABDQ9H4I3 376 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 DBNDD1Q9H9R9 158 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 hCG_2014768A0A024R1R8 64 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CLRN2A0PK11 232 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 COPEO14579 308 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CASP7P55210 303 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 IRX1P78414 480 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CDK17Q00537 523 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 MTM1Q13496 603 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 DBN1Q16643 649 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ANKRD20A8PQ5CZ79 823 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 FIGNQ5HY92 759 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 RNF168Q8IYW5 571 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 FGD4Q96M96 766 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SH2D3AQ9BRG2 576 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SUCLA2Q9P2R7 463 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ZC2HC1CQ53FD0 456 aaPredicted RBP8.27□□□□□ -1.08
CLCN3-209ENST00000513761 HSP90AA5PQ58FG0 334 aa8.27□□□□□ -1.08
CLCN3-209ENST00000513761 TMEM154Q6P9G4 183 aa8.27□□□□□ -1.08
CLCN3-209ENST00000513761 GRAMD1AQ96CP6 724 aa8.27□□□□□ -1.08
CLCN3-209ENST00000513761 C18orf8Q96DM3 657 aa8.27□□□□□ -1.08
CLCN3-209ENST00000513761 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 COMTP21964 271 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 RANBP1P43487 201 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 COPS2P61201 443 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 DLGAP5Q15398 846 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 DUSP9Q99956 384 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 COX16Q9P0S2 106 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SLC4A7Q9Y6M7 1214 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SPATA31A3Q5VYP0 1347 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TNNC2P02585 160 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 FMO5P49326 533 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 ARL4CP56559 192 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 YWHAEP62258 255 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 ASPHQ12797 758 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 MKRN3Q13064 507 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 NR1H3Q13133 447 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 NAIF1Q69YI7 327 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 RINT1Q6NUQ1 792 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SLC30A9Q6PML9 568 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 RGS9BPQ6ZS82 235 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 HSPH1Q92598 858 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 CDKL2Q92772 493 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SYN2Q92777 582 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 UBN1Q9NPG3 1134 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 FAM237AA0A1B0GTK4 181 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 KLC1Q07866 573 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 KIF22Q14807 665 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 MEI1Q5TIA1 1274 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 ADGRA1Q86SQ6 560 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 CRLF3Q8IUI8 442 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 LRRC43Q8N309 656 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 FBXO25Q8TCJ0 367 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 STAMBPL1Q96FJ0 436 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 KIF9Q9HAQ2 790 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 MAD2L2Q9UI95 211 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 L3MBTL1Q9Y468 752 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 PFASO15067 1338 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 GMNNO75496 209 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 NQO1P15559 274 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TARSP26639 723 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 YARSP54577 528 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TFAMQ00059 246 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 DNAJC3Q13217 504 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 CRYMQ14894 314 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 MMEL1Q495T6 779 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TMEM270Q6UE05 265 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 TRMT10CQ7L0Y3 403 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 KIAA0895Q8NCT3 520 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 CEP70Q8NHQ1 597 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 FAM20AQ96MK3 541 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 THAP2Q9H0W7 228 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 OSGEPQ9NPF4 335 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 ANLNQ9NQW6 1124 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 CDH16O75309 829 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 RPS6KA5O75582 802 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 UBOX5O94941 541 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 GGPS1O95749 300 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 PAX7P23759 505 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 GRAPQ13588 217 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 LRRC36Q1X8D7 754 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 WDR59Q6PJI9 974 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 NME8Q8N427 588 aa8.27□□□□□ -1.09
CLCN3-209ENST00000513761 GRAPLQ8TC17 118 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 PPWD1Q96BP3 646 aaKnown RBP8.27□□□□□ -1.09
CLCN3-209ENST00000513761 RBM15Q96T37 977 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■■□□ 17.5
CLCN3-209ENST00000513761 PXDNQ92626 1479 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 DIP2CQ9Y2E4 1556 aa8.26□□□□□ -1.09
CLCN3-209ENST00000513761 ADAMTS13Q76LX8 1427 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms