RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 BLOC1S2Q6QNY1 142 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 CCDC149Q6ZUS6 474 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 CCDC105Q8IYK2 499 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 FLCNQ8NFG4 579 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 AIFM3Q96NN9 605 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 KCNK12Q9HB15 430 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 PCDHA4Q9UN74 947 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 FANCMQ8IYD8 2048 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 COL4A3Q01955 1670 aa10.82□□□□□ -0.68
TCOF1-212ENST00000513538 DDX11L8A8MPP1 907 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 C2CD2LO14523 706 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 POMCP01189 267 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 MYBP10242 640 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 SKIP12755 728 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 NLRP5P59047 1200 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 AKAP17AQ02040 695 aaKnown RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 TOB2Q14106 344 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 LETM2Q2VYF4 491 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 OTOP3Q7RTS5 596 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 MRPL10Q7Z7H8 261 aaKnown RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 PPFIBP1Q86W92 1011 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 RNF168Q8IYW5 571 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 SIX5Q8N196 739 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 SMG8Q8ND04 991 aaKnown RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 RSAD2Q8WXG1 361 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 RSPH1Q8WYR4 309 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 NKD2Q969F2 451 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 HERC2P3Q9BVR0 1158 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 MAN1C1Q9NR34 630 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 PRG3Q9Y2Y8 225 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-212ENST00000513538 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
TCOF1-212ENST00000513538 KRBA1A5PL33 1030 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 NRP1O14786 923 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 TEX28O15482 410 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 RFPL2O75678 378 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 KLRC2P26717 231 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 DNM2P50570 870 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 PSMC5P62195 406 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 ANGPT1Q15389 498 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 INF2Q27J81 1249 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 C15orf39Q6ZRI6 1047 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 COLGALT2Q8IYK4 626 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 BLIDQ8IZY5 108 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 CMASQ8NFW8 434 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-212ENST00000513538 URGCPQ8TCY9 931 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 TMEM143Q96AN5 459 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-212ENST00000513538 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 MYADMQ96S97 322 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
TCOF1-212ENST00000513538 TMEM175Q9BSA9 504 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 EMILIN2Q9BXX0 1053 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 INO80BQ9C086 356 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-212ENST00000513538 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
TCOF1-212ENST00000513538 MYH15Q9Y2K3 1946 aa10.8□□□□□ -0.68
TCOF1-212ENST00000513538 EP300Q09472 2414 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 CARNS1A5YM72 827 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 ZBTB39O15060 712 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 DTNBO60941 627 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 SOD2P04179 222 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 CFHP08603 1231 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 SRGAP2CP0DJJ0 459 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 NCLP19338 710 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 DSC1Q08554 894 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 LAMTOR4Q0VGL1 99 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 PPP2R5CQ13362 524 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 KIAA0319Q5VV43 1072 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 MOXD1Q6UVY6 613 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 DTWD2Q8NBA8 298 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 ST13P5Q8NFI4 369 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 PRPF31Q8WWY3 499 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 ZNF707Q96C28 371 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 PGBD4Q96DM1 585 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 B3GALT6Q96L58 329 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 GAD1Q99259 594 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 WDR6Q9NNW5 1121 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 KCNMB3Q9NPA1 279 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 MRPL17Q9NRX2 175 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 MIOSQ9NXC5 875 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 DDX25Q9UHL0 483 aaKnown RBP10.79□□□□□ -0.68
TCOF1-212ENST00000513538 FAN1Q9Y2M0 1017 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
TCOF1-212ENST00000513538 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 INPPL1O15357 1258 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 TSPAN1O60635 241 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms