RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 PIGRP01833 764 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 SARSP49591 514 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 HAUS6Q7Z4H7 955 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 MRPL10Q7Z7H8 261 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 ZNF598Q86UK7 904 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 RSPH1Q8WYR4 309 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 HVCN1Q96D96 273 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 ADAM2Q99965 735 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 LMBRD1Q9NUN5 540 aa17.11■□□□□ 0.33
POLR2J3-218ENST00000513506 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 SLC16A4O15374 487 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 KLRC4O43908 158 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 EOMESO95936 686 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 AMHP03971 560 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 ARF4P18085 180 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 LIG1P18858 919 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 FGFR4P22455 802 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 PROZP22891 400 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 HTRA4P83105 476 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 SMAD3P84022 425 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 DPYDQ12882 1025 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 CUL4BQ13620 913 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 ALCAMQ13740 583 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 UBXN11Q5T124 520 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 NOTUMQ6P988 496 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 CNNM3Q8NE01 707 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 STAMQ92783 540 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 CCDC34Q96HJ3 373 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 RC3H2Q9HBD1 1191 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
POLR2J3-218ENST00000513506 TTC3P53804 2025 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 PRPF40AO75400 957 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 NR1I2O75469 434 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 ERLIN2O94905 339 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 GJB5O95377 273 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 EDN1P05305 212 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 PRKCBP05771 671 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 SKIP12755 728 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 KCNJ6P48051 423 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 RAB27AP51159 221 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 DEFB103AP81534 67 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 EPM2AIP1Q7L775 607 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 NPAS4Q8IUM7 802 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 MAP4K3Q8IVH8 894 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
POLR2J3-218ENST00000513506 COL4A6Q14031 1691 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 ABLIM1O14639 778 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 B4GALT5O43286 388 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 AFMP43652 599 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 COASYQ13057 564 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 PSMD2Q13200 908 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 KCNB1Q14721 858 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 ZNF689Q96CS4 500 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 MRPL4Q9BYD3 311 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 TBX20Q9UMR3 447 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 PCDHB13Q9Y5F0 798 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 STYXL1Q9Y6J8 313 aa17.08■□□□□ 0.32
POLR2J3-218ENST00000513506 N4BP3O15049 544 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 INPPL1O15357 1258 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 IDEP14735 1019 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 ASIC1P78348 528 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 RAD9AQ99638 391 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 PCDHA11Q9Y5I1 949 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 MICAL3Q7RTP6 2002 aa17.07■□□□□ 0.32
POLR2J3-218ENST00000513506 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms