RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 GOLGA6L6A8MZA4 724 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 RIOK3O14730 519 aaKnown RBP18.15■□□□□ 0.5
HMGCL-209ENST00000513148 PLS3P13797 630 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 ODR4Q5SWX8 454 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 SRGAP1Q7Z6B7 1085 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 ZBTB8OSQ8IWT0 167 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 MYCT1Q8N699 235 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 PRO3102Q9H379 93 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 TMX1Q9H3N1 280 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 KMT5AQ9NQR1 393 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 ERLIN2O94905 339 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 ZNF202O95125 648 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 SLFN14P0C7P3 912 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 MBTD1Q05BQ5 628 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 HERVK_113Q902F9 699 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 TSC1Q92574 1164 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 BLZF1Q9H2G9 400 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 PARVGQ9HBI0 331 aa18.15■□□□□ 0.5
HMGCL-209ENST00000513148 SLC16A4O15374 487 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 MGEA5O60502 916 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 WDR5P61964 334 aaKnown RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 ASIC1P78348 528 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 AMPD3Q01432 767 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 CDCA2Q69YH5 1023 aaPredicted RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 ZNF771Q7L3S4 317 aaPredicted RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 DNAJC19Q96DA6 116 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 TRIM9Q9C026 710 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 MTIF3Q9H2K0 278 aaKnown RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 LARSQ9P2J5 1176 aaKnown RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 PIN4Q9Y237 131 aaKnown RBP18.14■□□□□ 0.49
HMGCL-209ENST00000513148 PTPRSQ13332 1948 aa18.14■□□□□ 0.49
HMGCL-209ENST00000513148 ABHD14A-ACY1A0A1B0GW23 586 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 DENND3A2RUS2 1198 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 BAIAP3O94812 1187 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 KCNJ6P48051 423 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 DEFB103AP81534 67 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 POU5F1BQ06416 359 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 TMCO2Q7Z6W1 182 aaPredicted RBP18.13■□□□□ 0.49
HMGCL-209ENST00000513148 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 PAGE5Q96GU1 130 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 NFKBIZQ9BYH8 718 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 C2orf40Q9H1Z8 148 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 C17orf75Q9HAS0 396 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 ZNF131P52739 623 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 SFR1Q86XK3 245 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 IFNLR1Q8IU57 520 aaPredicted RBP18.13■□□□□ 0.49
HMGCL-209ENST00000513148 MYOCDQ8IZQ8 938 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
HMGCL-209ENST00000513148 ADAM2Q99965 735 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 FTHL17Q9BXU8 183 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 LRRC27Q9C0I9 530 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 TBC1D7Q9P0N9 293 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 USP20Q9Y2K6 914 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 SLC4A7Q9Y6M7 1214 aa18.13■□□□□ 0.49
HMGCL-209ENST00000513148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.12■□□□□ 0.49
HMGCL-209ENST00000513148 B4GALT5O43286 388 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 NR1I2O75469 434 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 SMTNP53814 917 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 CUL4BQ13620 913 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 KRBA2Q6ZNG9 492 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
HMGCL-209ENST00000513148 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 K7ENM7 598 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 TSPAN1O60635 241 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 PRKCBP05771 671 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 UBE2HP62256 183 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 MAPK6Q16659 721 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 RTN4RL1Q86UN2 441 aaPredicted RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 FAM178BQ8IXR5 827 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 AGPAT5Q9NUQ2 364 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 PANK4Q9NVE7 773 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 TMEM132AQ24JP5 1023 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 HERC4Q5GLZ8 1057 aaPredicted RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 FAM109BQ6ICB4 259 aaPredicted RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 FAM117BQ6P1L5 589 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
HMGCL-209ENST00000513148 ENGASEQ8NFI3 743 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 ARHGAP28Q9P2N2 729 aa18.11■□□□□ 0.49
HMGCL-209ENST00000513148 PHLPP2Q6ZVD8 1323 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 TTLL13PA6NNM8 815 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 SMTNL1A8MU46 457 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 K7ERI5 159 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 ENPP3O14638 875 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 EFCAB14O75071 495 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 UPP2O95045 317 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 EDN1P05305 212 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 PRR29P0C7W0 189 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 NMT1P30419 496 aaKnown RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 EFNA5P52803 228 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 AMHR2Q16671 573 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms