RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PPP2R5A	Q15172	486 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	FAM187B	Q17R55	369 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	C9orf50	Q5SZB4	431 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	KANK3	Q6NY19	840 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	PPP4R3CP	Q6ZMV5	832 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	RBM43	Q6ZSC3	357 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	ZNF365	Q70YC5	407 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	TMCO2	Q7Z6W1	182 aa	Predicted RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	KCNN1	Q92952	543 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	16.02	■□□□□ 0.16	1e-8	■□□□□ 10.6
MATR3-238	ENST00000512107	TARS2	Q9BW92	718 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	EIF2A	Q9BY44	585 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	IFIH1	Q9BYX4	1025 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	NUP62CL	Q9H1M0	184 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	ST6GALNAC4	Q9H4F1	302 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	MRPL44	Q9H9J2	332 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	CXXC1	Q9P0U4	656 aa	Predicted RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	KIAA1468	Q9P260	1216 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	LARS	Q9P2J5	1176 aa	Known RBP	16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	TBX20	Q9UMR3	447 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	MAPK8IP1	Q9UQF2	711 aa		16.02	■□□□□ 0.16
MATR3-238	ENST00000512107	COL4A6	Q14031	1691 aa		16.02	■□□□□ 0.15
MATR3-238	ENST00000512107	PHLPP2	Q6ZVD8	1323 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	MEFV	O15553	781 aa	Predicted RBP	16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	GCNT3	O95395	438 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	MYL1	P05976	194 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	FPGS	Q05932	587 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	PAK2	Q13177	524 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	MORC3	Q14149	939 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	CAVIN1	Q6NZI2	390 aa	Known RBP	16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	CATSPER4	Q7RTX7	472 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	ZBTB8OS	Q8IWT0	167 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	TMEM199	Q8N511	208 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	ZNF507	Q8TCN5	953 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	SMARCE1	Q969G3	411 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	ACO2	Q99798	780 aa	Known RBP	16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	GDF15	Q99988	308 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	CXCL16	Q9H2A7	254 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	PDZD7	Q9H5P4	517 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	PTPRH	Q9HD43	1115 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	AGPAT5	Q9NUQ2	364 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	EXOC1	Q9NV70	894 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	SEL1L	Q9UBV2	794 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	PRKAG2	Q9UGJ0	569 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	SQOR	Q9Y6N5	450 aa		16.01	■□□□□ 0.15
MATR3-238	ENST00000512107	MEIS3P2	A8K0S8	358 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107		K7ERI5	159 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	DLL1	O00548	723 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	ACKR2	O00590	384 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	ENPP3	O14638	875 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	TGFB1I1	O43294	461 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	MBD3	O95983	291 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	RPLP2	P05387	115 aa	Known RBP	16	■□□□□ 0.15
MATR3-238	ENST00000512107	RFC2	P35250	354 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	DEFB103A	P81534	67 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	CDC42EP1	Q00587	391 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	L1TD1	Q5T7N2	865 aa	Known RBP	16	■□□□□ 0.15
MATR3-238	ENST00000512107	OTOP2	Q7RTS6	562 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	NELFCD	Q8IXH7	590 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	MED15	Q96RN5	788 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	C2orf40	Q9H1Z8	148 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	NR2E3	Q9Y5X4	410 aa		16	■□□□□ 0.15
MATR3-238	ENST00000512107	CNTNAP2	Q9UHC6	1331 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PPP1R3G	B7ZBB8	358 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	ATF7	P17544	494 aa	Predicted RBP	15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PROZ	P22891	400 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	ADSS	P30520	456 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PRCP	P42785	496 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	MAPK6	Q16659	721 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	BMT2	Q1RMZ1	405 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	KLHL40	Q2TBA0	621 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	ZBTB41	Q5SVQ8	909 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	CNKSR3	Q6P9H4	555 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	MAP4K3	Q8IVH8	894 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	TMEM192	Q8IY95	271 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	SEPT8	Q92599	483 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	GSDMA	Q96QA5	445 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	ADAM2	Q99965	735 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	RNF39	Q9H2S5	420 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PRO3102	Q9H379	93 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	RNF19A	Q9NV58	838 aa		15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PRMT7	Q9NVM4	692 aa	Predicted RBP	15.99	■□□□□ 0.15
MATR3-238	ENST00000512107	PIN4	Q9Y237	131 aa	Known RBP	15.99	■□□□□ 0.15
MATR3-238	ENST00000512107		A0A1B0GUA9	196 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107		C9IYK1	514 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	GPR182	O15218	404 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	PIGR	P01833	764 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	SFPQ	P23246	707 aa	Known RBP eCLIP	15.98	■□□□□ 0.15	2e-6	■■□□□ 12.5
MATR3-238	ENST00000512107	EFNA5	P52803	228 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	SMTN	P53814	917 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	PMS1	P54277	932 aa	Known RBP	15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	PPIG	Q13427	754 aa	Known RBP eCLIP	15.98	■□□□□ 0.15	9e-10	■□□□□ 10.7
MATR3-238	ENST00000512107	PRPF4B	Q13523	1007 aa	Known RBP	15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	SHH	Q15465	462 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	SEZ6	Q53EL9	994 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	CCDC183	Q5T5S1	534 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	ZNF658	Q5TYW1	1059 aa	Predicted RBP	15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	CRIPAK	Q8N1N5	446 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	ZNF710	Q8N1W2	664 aa		15.98	■□□□□ 0.15
MATR3-238	ENST00000512107	TMEM130	Q8N3G9	435 aa		15.98	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms