RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PFKFB3Q16875 520 aaPredicted RBP21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 MTERF2Q49AM1 385 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 PHLDB3Q6NSJ2 640 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 SPATA31D4Q6ZUB0 917 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 ZMYND12Q9H0C1 365 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 ARHGEF3Q9NR81 526 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 MRPL17Q9NRX2 175 aaKnown RBP21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 SIT1Q9Y3P8 196 aa21.42■■□□□ 1.02
HMGCS1-206ENST00000511774 NRP1O14786 923 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 ZBTB43O43298 467 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 RFX1P22670 979 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 SFPQP23246 707 aaKnown RBP eCLIP21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 AK2P54819 239 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 SYNE3Q6ZMZ3 975 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 RSPH1Q8WYR4 309 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 RPS6KC1Q96S38 1066 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 RPP25Q9BUL9 199 aaKnown RBP21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 PCDHB2Q9Y5E7 798 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 CACNA1GO43497 2377 aa21.41■■□□□ 1.02
HMGCS1-206ENST00000511774 ESYT2A0FGR8 921 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 CARNS1A5YM72 827 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 GOLGA8AA7E2F4 631 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 PAPLNO95428 1278 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 SOD2P04179 222 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 ADD1P35611 737 aaKnown RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 HTR4Q13639 388 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 UBXN11Q5T124 520 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 MRPL10Q7Z7H8 261 aaKnown RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 RHPN2Q8IUC4 686 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 RNF168Q8IYW5 571 aaPredicted RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 REXO1Q8N1G1 1221 aaKnown RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 SMG7Q92540 1137 aaKnown RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 HERC2P3Q9BVR0 1158 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 NIFKQ9BYG3 293 aaKnown RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 RHOBTB2Q9BYZ6 727 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 IFT122Q9HBG6 1241 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 SUCLA2Q9P2R7 463 aaPredicted RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 SEPT9Q9UHD8 586 aaPredicted RBP21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 FAN1Q9Y2M0 1017 aa21.4■■□□□ 1.02
HMGCS1-206ENST00000511774 ANHXE9PGG2 379 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 POMCP01189 267 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 SKIP12755 728 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 RAB27AP51159 221 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 KIAA0319Q5VV43 1072 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 CATSPER4Q7RTX7 472 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 PJA1Q8NG27 643 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 SLC5A5Q92911 643 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 MINDY3Q9H8M7 445 aa21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 PRG3Q9Y2Y8 225 aaPredicted RBP21.39■■□□□ 1.01
HMGCS1-206ENST00000511774 ALDH2P05091 517 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 LAMP2P13473 410 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 DCLRE1AQ6PJP8 1040 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 ZC3H14Q6PJT7 736 aaKnown RBP21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 ZNF410Q86VK4 478 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 B3GALT6Q96L58 329 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 NLRP4Q96MN2 994 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 TMEM175Q9BSA9 504 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 ESYT1Q9BSJ8 1104 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 RSAD1Q9HA92 442 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 RXFP1Q9HBX9 757 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 AGPAT5Q9NUQ2 364 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 NUMBLQ9Y6R0 609 aa21.38■■□□□ 1.01
HMGCS1-206ENST00000511774 TDRD15B5MCY1 1934 aaKnown RBP21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 KLF18A0A0U1RQI7 1052 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 GAS7O60861 476 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 GLUD1P00367 558 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 URODP06132 367 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 HOXA11P31270 313 aaPredicted RBP21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 NONOQ15233 471 aaKnown RBP eCLIP21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 ADCK5Q3MIX3 580 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 B3GNT9Q6UX72 402 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 GET4Q7L5D6 327 aaPredicted RBP21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 COLGALT2Q8IYK4 626 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 URGCPQ8TCY9 931 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 STAMQ92783 540 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 NXPE3Q969Y0 559 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 SLC2A4RGQ9NR83 387 aa21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 MTF2Q9Y483 593 aaPredicted RBP21.37■■□□□ 1.01
HMGCS1-206ENST00000511774 MAFO75444 373 aaPredicted RBP21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 PSMD10O75832 226 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 ADH1AP07327 375 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 JAK3P52333 1124 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 XKR3Q5GH77 459 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 LRCH2Q5VUJ6 765 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 CYP26C1Q6V0L0 522 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 PALB2Q86YC2 1186 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 PGBD4Q96DM1 585 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 RIT2Q99578 217 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 MIOSQ9NXC5 875 aa21.36■■□□□ 1.01
HMGCS1-206ENST00000511774 SFNP31947 248 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 GLUD2P49448 558 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 STARD6P59095 220 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 GPC5P78333 572 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 CDC42EP1Q00587 391 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 PLA2G4FQ68DD2 849 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 ANO5Q75V66 913 aa21.35■■□□□ 1.01
HMGCS1-206ENST00000511774 RASEFQ8IZ41 740 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms