RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	CYP11B2	P19099	503 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	NCL	P19338	710 aa	Known RBP	13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	PRPH	P41219	470 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	BCAR1	P56945	870 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	MBTD1	Q05BQ5	628 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	GNL2	Q13823	731 aa	Known RBP	13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	NBR1	Q14596	966 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	IL17A	Q16552	155 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	ECM1	Q16610	540 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	NOMO2	Q5JPE7	1267 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	TMEM184A	Q6ZMB5	413 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	CNNM3	Q8NE01	707 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	MCPH1	Q8NEM0	835 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	ERMN	Q8TAM6	284 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	LPP	Q93052	612 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	CCDC51	Q96ER9	411 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	NRDE2	Q9H7Z3	1164 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	NGRN	Q9NPE2	291 aa	Known RBP	13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	TBC1D13	Q9NVG8	400 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	CLEC1B	Q9P126	229 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	LRWD1	Q9UFC0	647 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	STK24	Q9Y6E0	443 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	CNTNAP2	Q9UHC6	1331 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081		A0A1B0GUA9	196 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	TBX10	O75333	385 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	GLP2R	O95838	553 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	GALT	P07902	379 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	GJB2	P29033	226 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	ALDH7A1	P49419	539 aa	Known RBP	13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	KRT17	Q04695	432 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	SMAD2	Q15796	467 aa	Known RBP	13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	DUSP6	Q16828	381 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	FAM187B	Q17R55	369 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	RILPL1	Q5EBL4	403 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	GLB1L	Q6UWU2	654 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	SMG8	Q8ND04	991 aa	Known RBP	13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	CDCA3	Q99618	268 aa	Predicted RBP	13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	CSRNP2	Q9H175	543 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	FZD8	Q9H461	694 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	IGFLR1	Q9H665	355 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	TLE6	Q9H808	572 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	UBN1	Q9NPG3	1134 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	KANSL3	Q9P2N6	904 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	DAXX	Q9UER7	740 aa	Predicted RBP	13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	PRKAG3	Q9UGI9	489 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	FAM50B	Q9Y247	325 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	PCDHGC5	Q9Y5F6	944 aa		13.47	□□□□□ -0.25
CLDND1-223	ENST00000511081	FSD2	A1L4K1	749 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	INO80B-WBP1	J3KQ70	363 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	MBTPS2	O43462	519 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	USO1	O60763	962 aa	Known RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	ARF4	P18085	180 aa	Predicted RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	PBX3	P40426	434 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	NRIP1	P48552	1158 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	AFF1	P51825	1210 aa	Known RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	NCBP1	Q09161	790 aa	Known RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	COASY	Q13057	564 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	CUL4A	Q13619	759 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	HAUS3	Q68CZ6	603 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	NOTUM	Q6P988	496 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	POTEG	Q6S5H5	508 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	PADI6	Q6TGC4	694 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	MRPL43	Q8N983	215 aa	Known RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	MICAL1	Q8TDZ2	1067 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	BACH2	Q9BYV9	841 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	GPRC5C	Q9NQ84	441 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	IRAK3	Q9Y616	596 aa		13.46	□□□□□ -0.25
CLDND1-223	ENST00000511081	B4GALT3	O60512	393 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	DDHD2	O94830	711 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	ERLIN2	O94905	339 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	CCT6A	P40227	531 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	ATP2C1	P98194	919 aa	Predicted RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	SMAD4	Q13485	552 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	LONRF3	Q496Y0	759 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	DDX53	Q86TM3	631 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	RBM23	Q86U06	439 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	ZNF280B	Q86YH2	543 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	GJD3	Q8N144	294 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	KCTD17	Q8N5Z5	321 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	VN1R2	Q8NFZ6	395 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	IGSF21	Q96ID5	467 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	PRIMPOL	Q96LW4	560 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	CCDC43	Q96MW1	224 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	MMTAG2	Q9BU76	263 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	EIF2A	Q9BY44	585 aa	Known RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	RAB34	Q9BZG1	259 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	RSAD1	Q9HA92	442 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	CD207	Q9UJ71	328 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	IPP	Q9Y573	584 aa		13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.45	□□□□□ -0.26
CLDND1-223	ENST00000511081	ARHGEF35	A5YM69	484 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	HIDE1	A8MVS5	230 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	NT5C1B-RDH14	C9J2C7	533 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	PER2	O15055	1255 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	EFEMP2	O95967	443 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	ALDH2	P05091	517 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	ITGA4	P13612	1032 aa		13.44	□□□□□ -0.26
CLDND1-223	ENST00000511081	ZP2	Q05996	745 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms