RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 ZNF410Q86VK4 478 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 ECHDC2Q86YB7 292 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 TCP11Q8WWU5 503 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 PSPC1Q8WXF1 523 aaKnown RBP17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 MINDY3Q9H8M7 445 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 THEGQ9P2T0 379 aa17.2■□□□□ 0.34
SH3TC1-220ENST00000511002 A0A0C4DFX4 3053 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 TCF20Q9UGU0 1960 aaKnown RBP17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 PLXNA4Q9HCM2 1894 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 GOLGA6L4A6NEF3 574 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 TBKBP1A7MCY6 615 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 SRGAP2CP0DJJ0 459 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 ARL2P36404 184 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 LAMTOR4Q0VGL1 99 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 MAPK7Q13164 816 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 DAW1Q8N136 415 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 ZNF710Q8N1W2 664 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 IQUBQ8NA54 791 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 LMCD1Q9NZU5 365 aa17.19■□□□□ 0.34
SH3TC1-220ENST00000511002 DLL1O00548 723 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 HIP1RO75146 1068 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 GLRA2P23416 452 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 SYKP43405 635 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 CAPSQ13938 189 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 STAMQ92783 540 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 MRPL38Q96DV4 380 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 ALG13Q9NP73 1137 aaKnown RBP17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
SH3TC1-220ENST00000511002 VCANP13611 3396 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 MYMKA6NI61 221 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 ITGB1P05556 798 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 ZSCAN20P17040 1043 aaPredicted RBP17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 DNAJB1P25685 340 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 CAMK1Q14012 370 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 LONRF3Q496Y0 759 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 CLLU1OSQ5K130 101 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 LRRC55Q6ZSA7 311 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 SV2BQ7L1I2 683 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 CATSPER4Q7RTX7 472 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 RNF149Q8NC42 400 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 GBP4Q96PP9 640 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 CUEDC2Q9H467 287 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 ELAC1Q9H777 363 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 SPTBN5Q9NRC6 3674 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 PIN4Q9Y237 131 aaKnown RBP17.17■□□□□ 0.34
SH3TC1-220ENST00000511002 A0A0U1RQF3 1178 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 MEIS3P2A8K0S8 358 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 RB1P06400 928 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 LIG1P18858 919 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 SFPQP23246 707 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 KCNQ1P51787 676 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 CDC42EP1Q00587 391 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 TCEAL5Q5H9L2 206 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 GRAMD1CQ8IYS0 662 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 KLHL23Q8NBE8 558 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 LPPQ93052 612 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 CASD1Q96PB1 797 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 PYM1Q9BRP8 204 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 CWH43Q9H720 699 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 KBTBD4Q9NVX7 518 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 PLAGL2Q9UPG8 496 aa17.16■□□□□ 0.34
SH3TC1-220ENST00000511002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 SFI1A8K8P3 1242 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 IRS1P35568 1242 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 PHKA2P46019 1235 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 GIT2Q14161 759 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 DDX12PQ92771 950 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 ASB2Q96Q27 587 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 KIFC3Q9BVG8 833 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 TIPINQ9BVW5 301 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 MAGEF1Q9HAY2 307 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms