RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DKC1O60832 514 aaKnown RBP eCLIP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 P4HBP07237 508 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 SKIP12755 728 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 ALDH7A1P49419 539 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 LONRF3Q496Y0 759 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 CATSPER4Q7RTX7 472 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 HAS1Q92839 578 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 MFSD14AQ96MC6 490 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 BRMS1Q9HCU9 246 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 FAM105AQ9NUU6 356 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 MEIS3P2A8K0S8 358 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 TBX3O15119 743 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 ZNF623O75123 536 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 ZXDAP98168 799 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 EPHA7Q15375 998 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 EARS2Q5JPH6 523 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 TRIM67Q6ZTA4 783 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 SLC7A3Q8WY07 619 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 CASP10Q92851 521 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 TMEM169Q96HH4 297 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 CEP170P1Q96L14 293 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 FBXL18Q96ME1 805 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
HMGCL-208ENST00000509389 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 TMEM221A6NGB7 291 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 M0R296 226 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 CLASP2O75122 1294 aaKnown RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 ZC3H11AO75152 810 aaKnown RBP eCLIP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 OFD1O75665 1012 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 CXCL14O95715 111 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 RFC5P40937 340 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 TRAPPC10P48553 1259 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 RAB27AP51159 221 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 POLGP54098 1239 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 PTPAQ15257 358 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 KLHL40Q2TBA0 621 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 GLB1LQ6UWU2 654 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 BMP8AQ7Z5Y6 402 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 TMEM173Q86WV6 379 aaPredicted RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 C4orf19Q8IY42 314 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 PRPF31Q8WWY3 499 aaKnown RBP16.25■□□□□ 0.19
HMGCL-208ENST00000509389 TMEM143Q96AN5 459 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 TBC1D13Q9NVG8 400 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 INPP5FQ9Y2H2 1132 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 HCFC2Q9Y5Z7 792 aa16.25■□□□□ 0.19
HMGCL-208ENST00000509389 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 MARCH6O60337 910 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 CA8P35219 290 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 UBE2HP62256 183 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 SPIRE1Q08AE8 756 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
HMGCL-208ENST00000509389 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 EXOC8Q8IYI6 725 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 PSPC1Q8WXF1 523 aaKnown RBP16.24■□□□□ 0.19
HMGCL-208ENST00000509389 DYDC2Q96IM9 177 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 LXNQ9BS40 222 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 ZBP1Q9H171 429 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 MINDY3Q9H8M7 445 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
HMGCL-208ENST00000509389 AGPAT5Q9NUQ2 364 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 RGL1Q9NZL6 768 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 CDH22Q9UJ99 828 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 PCDHB2Q9Y5E7 798 aa16.24■□□□□ 0.19
HMGCL-208ENST00000509389 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 MBD3O95983 291 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 GALTP07902 379 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 LAMTOR4Q0VGL1 99 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 CTTNQ14247 550 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 BMS1Q14692 1282 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 TPRNQ4KMQ1 711 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 OTUD6AQ7L8S5 288 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 SRGAP1Q7Z6B7 1085 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 DDX53Q86TM3 631 aaKnown RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 GPT2Q8TD30 523 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 BCL7CQ8WUZ0 217 aaPredicted RBP16.23■□□□□ 0.19
HMGCL-208ENST00000509389 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 PGBD4Q96DM1 585 aa16.23■□□□□ 0.19
HMGCL-208ENST00000509389 IGSF21Q96ID5 467 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms