RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
SEC31A-228ENST00000509142 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
SEC31A-228ENST00000509142 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
SEC31A-228ENST00000509142 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.515e-7■■□□□ 13.8
SEC31A-228ENST00000509142 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
SEC31A-228ENST00000509142 MYH11P35749 1972 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PPP1R37O75864 691 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CPP00450 1065 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 RFX1P22670 979 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 SFNP31947 248 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 LIG3P49916 1009 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 DMP1Q13316 513 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 TADA2BQ86TJ2 420 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PXMP2Q9NR77 195 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 SUCLA2Q9P2R7 463 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PGAP2Q9UHJ9 254 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 NOC2LQ9Y3T9 749 aaKnown RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 TMEM253P0C7T8 217 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 UGCGQ16739 394 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 EMC10Q5UCC4 262 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 OTUD6AQ7L8S5 288 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CD302Q8IX05 232 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 C4orf19Q8IY42 314 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 DDX47Q9H0S4 455 aaKnown RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 HACL1Q9UJ83 578 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CES2O00748 559 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CCND2P30279 289 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PPP3CAQ08209 521 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 KDM7AQ6ZMT4 941 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 ACTRT1Q8TDG2 376 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 PLAAQ9Y263 795 aa11.85□□□□□ -0.51
SEC31A-228ENST00000509142 IGSF9BQ9UPX0 1349 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 CLSTN1O94985 981 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 LSP1P33241 339 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 HSPA9P38646 679 aaKnown RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 GMPSP49915 693 aaPredicted RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 TEPSINQ96N21 525 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 TIPINQ9BVW5 301 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 COL4A5P29400 1685 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 VWA5AO00534 786 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ZEB2O60315 1214 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SORBS3O60504 671 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 LYPLA2O95372 231 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 NR3C2P08235 984 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 HSD17B3P37058 310 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 MAP2K1Q02750 393 aaPredicted RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SAMD3Q8N6K7 520 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 VTI1AQ96AJ9 217 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SAAL1Q96ER3 474 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 BICD1Q96G01 975 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 WRNIP1Q96S55 665 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 KIFC3Q9BVG8 833 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 STRA6Q9BX79 667 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 PCDHA10Q9Y5I2 948 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 DCDC2CA8MYV0 355 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SART1O43290 800 aaKnown RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 FDX1P10109 184 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 DCAF12L1Q5VU92 463 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 POTEAQ6S8J7 498 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 NT5DC3Q86UY8 548 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 SLC30A5Q8TAD4 765 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 WHAMMQ8TF30 809 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ZKSCAN4Q969J2 545 aaPredicted RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 GPR88Q9GZN0 384 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 THAP2Q9H0W7 228 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
SEC31A-228ENST00000509142 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
SEC31A-228ENST00000509142 DENND3A2RUS2 1198 aa11.83□□□□□ -0.52
SEC31A-228ENST00000509142 CCDC188H7C350 402 aa11.83□□□□□ -0.52
SEC31A-228ENST00000509142 P4HA2O15460 535 aa11.83□□□□□ -0.52
SEC31A-228ENST00000509142 GTF2BQ00403 316 aa11.83□□□□□ -0.52
SEC31A-228ENST00000509142 TTC31Q49AM3 519 aaPredicted RBP11.83□□□□□ -0.52
SEC31A-228ENST00000509142 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
SEC31A-228ENST00000509142 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms