RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 KIAA1755Q5JYT7 1200 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 UBAP2Q5T6F2 1119 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 GRAMD4Q6IC98 578 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 B3GNT6Q6ZMB0 384 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ARHGEF18Q6ZSZ5 1173 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 PEX26Q7Z412 305 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 RUNDC3BQ96NL0 473 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 CRAMP1Q96RY5 1269 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MIPEPQ99797 713 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ECSITQ9BQ95 431 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 CADM1Q9BY67 442 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 GOLPH3Q9H4A6 298 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 FAIMQ9NVQ4 179 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 KBTBD4Q9NVX7 518 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 TBC1D7Q9P0N9 293 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ZSWIM5Q9P217 1185 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 RASAL2Q9UJF2 1139 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ZNF180Q9UJW8 692 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 SLC4A4Q9Y6R1 1079 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MARF1Q9Y4F3 1742 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ARFGEF2Q9Y6D5 1785 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ALDH2P05091 517 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 PYGMP11217 842 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 CDK4P11802 303 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 CREB1P16220 341 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 TRAPPC10P48553 1259 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 GALK1P51570 392 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 EMP3P54852 163 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 NLRP6P59044 892 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 PDE1BQ01064 536 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MOGSQ13724 837 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 MAP7D1Q3KQU3 841 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 ACAD11Q709F0 780 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 SLFN11Q7Z7L1 901 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 DNAJC1Q96KC8 554 aaKnown RBP10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 GRHL1Q9NZI5 618 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 PARP2Q9UGN5 583 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 SNX24Q9Y343 169 aa10.74□□□□□ -0.69
PDGFRA-207ENST00000509092 C5P01031 1676 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FAM196BA6NMK8 535 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 STRNO43815 780 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FGFR1OPO95684 399 aaKnown RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 RARGP13631 454 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 CPA3P15088 417 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FGFR4P22455 802 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 PDE4DQ08499 809 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 WTAPQ15007 396 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 C3orf62Q6ZUJ4 267 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 DEPTORQ8TB45 409 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 DTX3LQ8TDB6 740 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 DQX1Q8TE96 717 aaKnown RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 GAB3Q8WWW8 586 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 POLR3CQ9BUI4 534 aaPredicted RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 NKIRAS1Q9NYS0 192 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 BOLA2-SMG1P6H3BVE0 249 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 P4HA2O15460 535 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 RNASEH1O60930 286 aaKnown RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FOXN2P32314 431 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 GRIA2P42262 883 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 GEMIN4P57678 1058 aaKnown RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 MPP2Q14168 576 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 GRM2Q14416 872 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 IZUMO2Q6UXV1 221 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 PPP1R21Q6ZMI0 780 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 USP54Q70EL1 1684 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FANCBQ8NB91 859 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 FNDC8Q8TC99 324 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 CTNNBL1Q8WYA6 563 aaPredicted RBP10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 TMEM60Q9H2L4 133 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 CNNM2Q9H8M5 875 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 CLIC5Q9NZA1 410 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 ZNF711Q9Y462 761 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 ROBO1Q9Y6N7 1651 aa10.73□□□□□ -0.69
PDGFRA-207ENST00000509092 ALS2Q96Q42 1657 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 COL22A1Q8NFW1 1626 aaPredicted RBP10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 PFASO15067 1338 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 ATP8B3O60423 1300 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 A8MXQ7 604 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 MAGEB2O15479 319 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 MAGEB3O15480 346 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 CCDC22O60826 627 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 OPHN1O60890 802 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 FGGP02679 453 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 BRAFP15056 766 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 CRABP2P29373 138 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 IL9RQ01113 521 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 KLHL30Q0D2K2 578 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 TAF1BQ53T94 588 aaPredicted RBP10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 CENPPQ6IPU0 288 aa10.72□□□□□ -0.69
PDGFRA-207ENST00000509092 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms