RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 PPM1AP35813 382 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 KRT17Q04695 432 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 MBTD1Q05BQ5 628 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 ADAM15Q13444 863 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 NOMO2Q5JPE7 1267 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 CDR2LQ86X02 465 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 SLC39A11Q8N1S5 342 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 APOL6Q9BWW8 343 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 EIF2AQ9BY44 585 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 POLD4Q9HCU8 107 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 TBC1D13Q9NVG8 400 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 PUF60Q9UHX1 559 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 HIDE1A8MVS5 230 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 B4GALT5O43286 388 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 OFD1O75665 1012 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 GLP2RO95838 553 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 POMCP01189 267 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 PRR29P0C7W0 189 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 XRCC6P12956 609 aaKnown RBP eCLIP16.43■□□□□ 0.224e-17■□□□□ 10.6
UBE2D3-228ENST00000508974 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 AFF1P51825 1210 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 PLCB3Q01970 1234 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 ECM1Q16610 540 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 HAUS3Q68CZ6 603 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 LLGL2Q6P1M3 1020 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 PADI6Q6TGC4 694 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 AGMOQ6ZNB7 445 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 TMC7Q7Z402 723 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 TMEM173Q86WV6 379 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 FAM178BQ8IXR5 827 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 EFHBQ8N7U6 833 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 SNX29Q8TEQ0 813 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 KHSRPQ92945 711 aaKnown RBP eCLIP16.43■□□□□ 0.223e-7■■■□□ 17.8
UBE2D3-228ENST00000508974 NRDE2Q9H7Z3 1164 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 RSAD1Q9HA92 442 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 DNAJB4Q9UDY4 337 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 CD207Q9UJ71 328 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 DBR1Q9UK59 544 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 HES2Q9Y543 173 aa16.43■□□□□ 0.22
UBE2D3-228ENST00000508974 FSCN2O14926 492 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 B4GALT3O60512 393 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 ZNF623O75123 536 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 ITGA4P13612 1032 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 LIG1P18858 919 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 CDC25AP30304 524 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 NOTUMQ6P988 496 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 URGCPQ8TCY9 931 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 DDX19AQ9NUU7 478 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 CLEC1BQ9P126 229 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 KIAA1024Q9UPX6 916 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 LZTS1Q9Y250 596 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 IPPQ9Y573 584 aa16.42■□□□□ 0.22
UBE2D3-228ENST00000508974 MBTPS2O43462 519 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 ARF4P18085 180 aaPredicted RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 MCM2P49736 904 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 ZRSR1Q15695 479 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 IL17AQ16552 155 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 AMHR2Q16671 573 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 MRPL10Q7Z7H8 261 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 VN1R2Q8NFZ6 395 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 BCL7CQ8WUZ0 217 aaPredicted RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 AUTS2Q8WXX7 1259 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 BSNDQ8WZ55 320 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 BHMT2Q9H2M3 363 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
UBE2D3-228ENST00000508974 E9PMD0 336 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 DDHD2O94830 711 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 NPTXRO95502 500 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 AXLP30530 894 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 MLH1P40692 756 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 SLC11A1P49279 550 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 DUSP6Q16828 381 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 TMEM132AQ24JP5 1023 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 DTHD1Q6ZMT9 781 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 GJD3Q8N144 294 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 IGSF22Q8N9C0 903 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 MSLNLQ96KJ4 702 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 FAM193BQ96PV7 902 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 RAB34Q9BZG1 259 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 EPHX3Q9H6B9 360 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 USP20Q9Y2K6 914 aa16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-228ENST00000508974 GALTP07902 379 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms