RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 MRPL10Q7Z7H8 261 aaKnown RBP20.11■□□□□ 0.81
CLDND1-220ENST00000508902 PPM1EQ8WY54 764 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 SAMD11Q96NU1 681 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 DACT1Q9NYF0 836 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 PCDHB2Q9Y5E7 798 aa20.11■□□□□ 0.81
CLDND1-220ENST00000508902 SFI1A8K8P3 1242 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 ITGB1P05556 798 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
CLDND1-220ENST00000508902 GUCY2CP25092 1073 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 MCM6Q14566 821 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 EEF1DP3Q658K8 133 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 MICALL1Q8N3F8 863 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 NT5C3AQ9H0P0 336 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 HES2Q9Y543 173 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 TRIP11Q15643 1979 aa20.1■□□□□ 0.81
CLDND1-220ENST00000508902 CNTNAP2Q9UHC6 1331 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 SLC26A4O43511 780 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 OFD1O75665 1012 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 BRD1O95696 1058 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 EOMESO95936 686 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLDND1-220ENST00000508902 UBA7P41226 1012 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 NPTX2P47972 431 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 FAM187BQ17R55 369 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 RAD54LQ92698 747 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 KIFAP3Q92845 792 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 NXF3Q9H4D5 531 aaKnown RBP20.09■□□□□ 0.81
CLDND1-220ENST00000508902 PDZD7Q9H5P4 517 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 ALG13Q9NP73 1137 aaKnown RBP20.09■□□□□ 0.81
CLDND1-220ENST00000508902 IPPQ9Y573 584 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 PCDHGC5Q9Y5F6 944 aa20.09■□□□□ 0.81
CLDND1-220ENST00000508902 TDRD15B5MCY1 1934 aaKnown RBP20.08■□□□□ 0.81
CLDND1-220ENST00000508902 TTC28Q96AY4 2481 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 A0A1B0GUA9 196 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 ERLIN2O94905 339 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 PEX3P56589 373 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 NT5DC1Q5TFE4 455 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 KLHL23Q8NBE8 558 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 COLGALT1Q8NBJ5 622 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 SPPL3Q8TCT6 385 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 CXCL16Q9H2A7 254 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 ARHGAP28Q9P2N2 729 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.81
CLDND1-220ENST00000508902 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.8
CLDND1-220ENST00000508902 PRKCBP05771 671 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 RB1P06400 928 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 AXLP30530 894 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 RAB27AP51159 221 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 DNM1Q05193 864 aaKnown RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 PCBP1Q15365 356 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 NOTUMQ6P988 496 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 TMEM173Q86WV6 379 aaPredicted RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 KCTD17Q8N5Z5 321 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 DEPTORQ8TB45 409 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 BCL7CQ8WUZ0 217 aaPredicted RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 MRPL38Q96DV4 380 aaKnown RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 REEP2Q9BRK0 252 aa20.07■□□□□ 0.8
CLDND1-220ENST00000508902 PRMT7Q9NVM4 692 aaPredicted RBP20.07■□□□□ 0.8
CLDND1-220ENST00000508902 SPTLC2O15270 562 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 CSPG5O95196 566 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 NPTXRO95502 500 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 YEATS4O95619 227 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 IRS1P35568 1242 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 DHX8Q14562 1220 aaKnown RBP20.06■□□□□ 0.8
CLDND1-220ENST00000508902 STK38Q15208 465 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 GPBP1Q86WP2 473 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 ZBTB8OSQ8IWT0 167 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 LRRC43Q8N309 656 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 P2RX5Q93086 422 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 CCDC51Q96ER9 411 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 CALML4Q96GE6 196 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 CDK5RAP3Q96JB5 506 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 FIZ1Q96SL8 496 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 PLVAPQ9BX97 442 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 TBC1D13Q9NVG8 400 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 MIOSQ9NXC5 875 aa20.06■□□□□ 0.8
CLDND1-220ENST00000508902 ACKR2O00590 384 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 ABLIM1O14639 778 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 INPPL1O15357 1258 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 HOXA2O43364 376 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 GTPBP6O43824 516 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-220ENST00000508902 LIG1P18858 919 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 GIT2Q14161 759 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 SHC4Q6S5L8 630 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 ZNF280BQ86YH2 543 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 GSTCDQ8NEC7 633 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 LARP4BQ92615 738 aaKnown RBP20.05■□□□□ 0.8
CLDND1-220ENST00000508902 IFT74Q96LB3 600 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 PRIMPOLQ96LW4 560 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-220ENST00000508902 C11orf84Q9BUA3 381 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-220ENST00000508902 C2orf40Q9H1Z8 148 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 NRDE2Q9H7Z3 1164 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 LMCD1Q9NZU5 365 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 DNAJB4Q9UDY4 337 aa20.05■□□□□ 0.8
CLDND1-220ENST00000508902 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms