RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CLUP10909 449 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 STAT1P42224 750 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 AARSP49588 968 aaKnown RBP eCLIP4.23□□□□□ -1.735e-7■■■■■ 27.5
NEDD4-209ENST00000508871 BCAR1P56945 870 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 MTA1Q13330 715 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM95Q3KNT9 176 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PHLDB2Q86SQ0 1253 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CEP57Q86XR8 500 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 XAGE3Q8WTP9 111 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 USP13Q92995 863 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ZDHHC15Q96MV8 337 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SEZ6LQ9BYH1 1024 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 DCTPP1Q9H773 170 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CHST12Q9NRB3 414 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TOPORSQ9NS56 1045 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 EMC3Q9P0I2 261 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PCSK1NQ9UHG2 260 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SATB2Q9UPW6 733 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SLC27A5Q9Y2P5 690 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 USP42Q9H9J4 1324 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 RFX7Q2KHR2 1363 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 IL4RP24394 825 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PRIM1P49642 420 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 KIF4BQ2VIQ3 1234 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SH2D4BQ5SQS7 431 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 C1QTNF12Q5T7M4 302 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PCNX4Q63HM2 1172 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 KRT222Q8N1A0 295 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ARHGAP18Q8N392 663 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ZBTB8BQ8NAP8 495 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SLC17A8Q8NDX2 589 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 BICD1Q96G01 975 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TTC25Q96NG3 672 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 AAASQ9NRG9 546 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM260Q9NX78 707 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ZMYM5Q9UJ78 669 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 GTF3C4Q9UKN8 822 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 AXIN2Q9Y2T1 843 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 FPGT-TNNI3KV9GXZ4 949 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 EIF3CLB5ME19 914 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PITPNM1O00562 1244 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 RANBP6O60518 1105 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 MTX2O75431 263 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 IDH3AP50213 366 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 UBASH3AP57075 661 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 COPS2P61201 443 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 GPSM2P81274 684 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ARF5P84085 180 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 KDELC1Q6UW63 502 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ATG14Q6ZNE5 492 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CCDC84Q86UT8 332 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 EGFL6Q8IUX8 553 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 C7orf31Q8N865 590 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TNIP2Q8NFZ5 429 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PIBF1Q8WXW3 757 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 UBXN10Q96LJ8 280 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 RIPOR3Q96MK2 946 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 KCNJ15Q99712 375 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 LRRCC1Q9C099 1032 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ROGDIQ9GZN7 287 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CHMP5Q9NZZ3 219 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 LRRC14BA6NHZ5 514 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 F8W031 263 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TOR1BO14657 336 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 NVLO15381 856 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 BAIAP3O94812 1187 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 FTCDO95954 541 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 EZRP15311 586 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PTGER2P43116 358 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 RBM5P52756 815 aaKnown RBP eCLIP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 MZT2AQ6P582 158 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 UBE3BQ7Z3V4 1068 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PTRH1Q86Y79 214 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TRIM56Q9BRZ2 755 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 UBE2OQ9C0C9 1292 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TRIT1Q9H3H1 467 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 OSBPL3Q9H4L5 887 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 LZTFL1Q9NQ48 299 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 DZANK1Q9NVP4 752 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 STAP2Q9UGK3 403 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 DDX20Q9UHI6 824 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 JCADQ9P266 1359 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CASQ2O14958 399 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 MYO1BO43795 1136 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZSCAN22P10073 491 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PRKCHP24723 683 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 MTX1Q13505 466 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TNIP1Q15025 636 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 LETM2Q2VYF4 491 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 HSF5Q4G112 596 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 COX20Q5RI15 118 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CEP85Q6P2H3 762 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 DRICH1Q6PGQ1 229 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CREG2Q8IUH2 290 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 THUMPD2Q9BTF0 503 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZCCHC17Q9NP64 241 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHA9Q9Y5H5 950 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms