RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 XIRP2A4UGR9 3374 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 HIDE1A8MVS5 230 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 INO80B-WBP1J3KQ70 363 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 DGAT1O75907 488 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 MCM7P33993 719 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 TIE1P35590 1138 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 SPIRE1Q08AE8 756 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 PCBP1Q15365 356 aaKnown RBP eCLIP11.23□□□□□ -0.619e-7■□□□□ 10.8
UBE2D3-227ENST00000508818 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 SMRP1Q8NCR6 262 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 HSD17B14Q9BPX1 270 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 UBN1Q9NPG3 1134 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 KANSL3Q9P2N6 904 aa11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-227ENST00000508818 PRR33A8MZF0 331 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 OFD1O75665 1012 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 LYPLA2O95372 231 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 GLP2RO95838 553 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 ALDH2P05091 517 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.614e-17■□□□□ 10.6
UBE2D3-227ENST00000508818 ITGA4P13612 1032 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 AXLP30530 894 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 RBM10P98175 930 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 GIT2Q14161 759 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 ANKRD54Q6NXT1 300 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 CASP10Q92851 521 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 PHF7Q9BWX1 381 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 RSAD1Q9HA92 442 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 PLXNA4Q9HCM2 1894 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 CNTNAP2Q9UHC6 1331 aa11.22□□□□□ -0.61
UBE2D3-227ENST00000508818 A0A087WWV3 80 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 MEIS3P2A8K0S8 358 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 NR1I2O75469 434 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 GALTP07902 379 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 PTENP60484 403 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 ZNF174Q15697 407 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 NOTUMQ6P988 496 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 MAEAQ7L5Y9 396 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 DDX53Q86TM3 631 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 CCDC51Q96ER9 411 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 IGSF21Q96ID5 467 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 MTMR9Q96QG7 549 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 NACC1Q96RE7 527 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 C11orf16Q9NQ32 467 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 STK39Q9UEW8 545 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 MUTYHQ9UIF7 546 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
UBE2D3-227ENST00000508818 ATG2AQ2TAZ0 1938 aa11.21□□□□□ -0.62
UBE2D3-227ENST00000508818 POTEMA6NI47 508 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 USO1O60763 962 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 POMCP01189 267 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 NCLP19338 710 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 ARL2P36404 184 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 SLC11A1P49279 550 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 RARRES1P49788 294 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 POU5F1BQ06416 359 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 CBX2Q14781 532 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 AGMOQ6ZNB7 445 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 ZNF280BQ86YH2 543 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 APOL6Q9BWW8 343 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 XPNPEP1Q9NQW7 623 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
UBE2D3-227ENST00000508818 ARHGEF35A5YM69 484 aa11.19□□□□□ -0.62
UBE2D3-227ENST00000508818 LRRIQ4A6NIV6 560 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms