RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CFHP08603 1231 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 SRFP11831 508 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 TGM1P22735 817 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.723e-6■■■□□ 15.9
NEDD9-211ENST00000508546 DRP2Q13474 957 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 PRR16Q569H4 304 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 ZNF410Q86VK4 478 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-211ENST00000508546 SLC44A3Q8N4M1 653 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 LENG9Q96B70 501 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 TBC1D17Q9HA65 648 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 PARD6AQ9NPB6 346 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
NEDD9-211ENST00000508546 DLGAP2Q9P1A6 1054 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 DPP7Q9UHL4 492 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 USP18Q9UMW8 372 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 INPP5FQ9Y2H2 1132 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 CLUHO75153 1309 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 A0A087WZ62 844 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 CCDC195A0A1B0GUA6 201 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ZBTB43O43298 467 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 B4GALT3O60512 393 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 C1RP00736 705 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ALDH2P05091 517 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ADH1AP07327 375 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 RFX1P22670 979 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 SFNP31947 248 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 GBP2P32456 591 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 DNM2P50570 870 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 RCAN1P53805 252 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 UGCGQ16739 394 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ZNF280BQ86YH2 543 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 GPR161Q8N6U8 529 aaKnown RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 EXOC6Q8TAG9 804 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 URGCPQ8TCY9 931 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 RSAD2Q8WXG1 361 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 RIT2Q99578 217 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 TMEM175Q9BSA9 504 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 FAM217BQ9NTX9 383 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 ANGPTL2Q9UKU9 493 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 CA14Q9ULX7 337 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 SMG5Q9UPR3 1016 aaKnown RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 PIN4Q9Y237 131 aaKnown RBP10.57□□□□□ -0.72
NEDD9-211ENST00000508546 SSX2IPQ9Y2D8 614 aa10.57□□□□□ -0.72
NEDD9-211ENST00000508546 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 ADAMTS3O15072 1205 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 SPTLC1O15269 473 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 INPPL1O15357 1258 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 DDHD2O94830 711 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 SOD2P04179 222 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 URODP06132 367 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 PMLP29590 882 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 JAK3P52333 1124 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 EXOSC10Q01780 885 aaKnown RBP10.56□□□□□ -0.72
NEDD9-211ENST00000508546 LONRF3Q496Y0 759 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
NEDD9-211ENST00000508546 RDM1Q8NG50 284 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 CCDC12Q8WUD4 166 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-211ENST00000508546 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 RPS6KC1Q96S38 1066 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 MYADMQ96S97 322 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 HERC2P3Q9BVR0 1158 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 C6orf50Q9HD87 102 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 SLC2A4RGQ9NR83 387 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.56□□□□□ -0.72
NEDD9-211ENST00000508546 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 FAN1Q9Y2M0 1017 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 CNTNAP2Q9UHC6 1331 aa10.56□□□□□ -0.72
NEDD9-211ENST00000508546 GOLGA8AA7E2F4 631 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GOLGA8BA8MQT2 603 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 ANHXE9PGG2 379 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 NRP1O14786 923 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SLC30A4O14863 429 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 MSH4O15457 936 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 TEX28O15482 410 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GAS7O60861 476 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 STBD1O95210 358 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 EFEMP2O95967 443 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GLUD1P00367 558 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GLULP15104 373 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 KCNA4P22459 653 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 GNA11P29992 359 aa10.55□□□□□ -0.72
NEDD9-211ENST00000508546 CDC27P30260 824 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms