RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ACVRL1P37023 503 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 SCNN1GP51170 649 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 NPEPPSP55786 919 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 SESN3P58005 492 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 PTH1RQ03431 593 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 MGAT5Q09328 741 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 IGFL4Q6B9Z1 124 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 TAS1R1Q7RTX1 841 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 MSL3Q8N5Y2 521 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 OR14C36Q8NHC7 312 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 ZNF512Q96ME7 567 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 ZNF703Q9H7S9 590 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
TOPBP1-206ENST00000508524 NPIPB8E9PQR5 432 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 FZD7O75084 574 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 CFBP00751 764 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 LPLP06858 475 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 VIL1P09327 827 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 XPAP23025 273 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 CRHR2Q13324 411 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 CT83Q5H943 113 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 MFSD5Q6N075 450 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 LMBR1LQ6UX01 489 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 TMPRSS6Q8IU80 811 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 GLB1L2Q8IW92 636 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 ZNF341Q9BYN7 854 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 KCTD10Q9H3F6 313 aa7.45□□□□□ -1.22
TOPBP1-206ENST00000508524 NRP1O14786 923 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 EYA4O95677 639 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 RABGGTBP53611 331 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 NRG3P56975 720 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 C1QL3Q5VWW1 255 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 ELOA2Q8IYF1 753 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 ARL8AQ96BM9 186 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 PLEKHG4BQ96PX9 1271 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 CDY2AQ9Y6F7 541 aa7.44□□□□□ -1.22
TOPBP1-206ENST00000508524 BRINP1O60477 761 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 IGSF3O75054 1194 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 TMEM127O75204 238 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 CASRP41180 1078 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 GDF5P43026 501 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 MAN2A2P49641 1150 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 FSCN1Q16658 493 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 FAM214AQ32MH5 1076 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 HTR3DQ70Z44 454 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 KRT26Q7Z3Y9 468 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 MDGA1Q8NFP4 955 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 EAF2Q96CJ1 260 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 VTA1Q9NP79 307 aa7.43□□□□□ -1.22
TOPBP1-206ENST00000508524 KLRG2A4D1S0 409 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 ENPP1P22413 925 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 LGALS4P56470 323 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 STAT4Q14765 748 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 UBE3CQ15386 1083 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 EGFLAMQ63HQ2 1017 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 CMIPQ8IY22 773 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 MB21D1Q8N884 522 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 ACAP3Q96P50 834 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 CSRNP2Q9H175 543 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 SRRDQ9UH36 339 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 HS3ST3A1Q9Y663 406 aa7.42□□□□□ -1.22
TOPBP1-206ENST00000508524 CYR61O00622 381 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 HOXA3O43365 443 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 NARSO43776 548 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 IPO13O94829 963 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 ZNF202O95125 648 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 SLPIP03973 132 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 LTA4HP09960 611 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 WNT3AP56704 352 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 UGT8Q16880 541 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 LSM12Q3MHD2 195 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 CT47A1Q5JQC4 288 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 APBB1IPQ7Z5R6 666 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 GSPT2Q8IYD1 628 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 ATXN2LQ8WWM7 1075 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 GPR87Q9BY21 358 aa7.41□□□□□ -1.22
TOPBP1-206ENST00000508524 MFAP3LO75121 409 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 MEF2AQ02078 507 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 TUBA3CQ13748 450 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 CNGB1Q14028 1251 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 TOB2Q14106 344 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 FNDC7Q5VTL7 733 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 TUBA3EQ6PEY2 450 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 OR5M3Q8NGP4 307 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 LMBR1Q8WVP7 490 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 MNTQ99583 582 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 FAM126AQ9BYI3 521 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 PARPBPQ9NWS1 579 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 EDARQ9UNE0 448 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 XDHP47989 1333 aa7.4□□□□□ -1.22
TOPBP1-206ENST00000508524 CLSTN1O94985 981 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 GNAT2P19087 354 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 POU3F3P20264 500 aaPredicted RBP7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 SLC25A3Q00325 362 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 DUSP2Q05923 314 aa7.39□□□□□ -1.23
TOPBP1-206ENST00000508524 MRPL49Q13405 166 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms