RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZNF174Q15697 407 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 ESRP1Q6NXG1 681 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 ARHGEF19Q8IW93 802 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 GLB1L3Q8NCI6 653 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 C8orf37Q96NL8 207 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 DNAJC7Q99615 494 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 NDC1Q9BTX1 674 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 HIRIP3Q9BW71 556 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 LSM14BQ9BX40 385 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 WDR11Q9BZH6 1224 aa6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 INO80BQ9C086 356 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 TNPO3Q9Y5L0 923 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-209ENST00000508304 DNAJC6O75061 913 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 TYRP1P17643 537 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 KIAA1841Q6NSI8 718 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 UNQ6494/PRO21346Q6UXR6 183 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 RD3Q7Z3Z2 195 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 FAM83AQ86UY5 434 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 GLCCI1Q86VQ1 547 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 PHYKPLQ8IUZ5 450 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 UNC5BQ8IZJ1 945 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 PIK3C3Q8NEB9 887 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 ANKFY1Q9P2R3 1169 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 DKK2Q9UBU2 259 aa6.44□□□□□ -1.38
TRAPPC13-209ENST00000508304 ALDH1A2O94788 518 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 PRPF6O94906 941 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 IGFALSP35858 605 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 WNT3AP56704 352 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 CCDC62Q6P9F0 684 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 DOK3Q7L591 496 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 C7orf31Q8N865 590 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 NOL10Q9BSC4 688 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 MYL10Q9BUA6 226 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 CHST2Q9Y4C5 530 aa6.43□□□□□ -1.38
TRAPPC13-209ENST00000508304 RNASET2O00584 256 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 PLD2O14939 933 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 SLC9A1P19634 815 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 MRPL49Q13405 166 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 CREB3L3Q68CJ9 461 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 TIGD7Q6NT04 549 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 GDF7Q7Z4P5 450 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 LINC00476Q8WZB0 136 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 DCLRE1CQ96SD1 692 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 ELF4Q99607 663 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 EPC1Q9H2F5 836 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 CABP5Q9NP86 173 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 AKIP1Q9NQ31 210 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 B4GALT6Q9UBX8 382 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 PTCH2Q9Y6C5 1203 aa6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 EPN1Q9Y6I3 576 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-209ENST00000508304 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 NCR1O76036 304 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 CASRP41180 1078 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 AVPR1BP47901 424 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 BEAN1Q3B7T3 259 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 OR5M3Q8NGP4 307 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 ARMC5Q96C12 935 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 COQ10AQ96MF6 247 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 POFUT1Q9H488 388 aa6.41□□□□□ -1.38
TRAPPC13-209ENST00000508304 APOL3O95236 402 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 ASLP04424 464 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 CD69Q07108 199 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 PRR16Q569H4 304 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 GPRIN1Q7Z2K8 1008 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 LCORLQ8N3X6 602 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 IL17RAQ96F46 866 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 SPO11Q9Y5K1 396 aa6.4□□□□□ -1.38
TRAPPC13-209ENST00000508304 LEFTY2O00292 366 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 ZNF185O15231 689 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 RAPGEF3O95398 923 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 BMPR1AP36894 532 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 SEC24CP53992 1094 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 SF3A1Q15459 793 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 FBXO42Q6P3S6 717 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 CMTR2Q8IYT2 770 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
TRAPPC13-209ENST00000508304 CBX4O00257 560 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 DNAJC8O75937 253 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 NDUFA10O95299 355 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 LY86O95711 162 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 CDK4P11802 303 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 GZMKP49863 264 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 RBL2Q08999 1139 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 FOXI1Q12951 378 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 ZNF460Q14592 562 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 PLXDC1Q8IUK5 500 aa6.38□□□□□ -1.39
TRAPPC13-209ENST00000508304 ZZZ3Q8IYH5 903 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms