RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PACSIN1Q9BY11 444 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 STK33Q9BYT3 514 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TXLNGYQ9BZA5 131 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 OSBPL7Q9BZF2 842 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRIM7Q9C029 511 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 DPH5Q9H2P9 285 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 DHX36Q9H2U1 1008 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOD2Q9HC29 1040 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 VAT1LQ9HCJ6 419 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TMEM260Q9NX78 707 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOP53Q9NZM5 478 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 GCNT4Q9P109 453 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SEL1LQ9UBV2 794 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 AMACRQ9UHK6 382 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TPX2Q9ULW0 747 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PACSIN2Q9UNF0 486 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIAA1024Q9UPX6 916 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MTMR7Q9Y216 660 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP8A1Q9Y2Q0 1164 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PCDHA2Q9Y5H9 948 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TLL2Q9Y6L7 1015 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PASKQ96RG2 1323 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MYH10P35580 1976 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 NAV1Q8NEY1 1877 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIF13BQ9NQT8 1826 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 AFF2P51816 1311 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CNTNAP4Q9C0A0 1308 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYP3A7-CYP3A51PA0A087WV96 503 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 GPR75-ASB3A0A0A6YYF3 556 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ANKRD62A6NC57 917 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SPDYE3A6NKU9 549 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L5A8MUK1 530 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PHF20L1A8MW92 1017 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 NDC80O14777 642 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 RASGRF2O14827 1237 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZBTB5O15062 677 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 WFS1O76024 890 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TTLL1O95922 423 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 FOSP01100 380 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 NR3C1P04150 777 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 VIMP08670 466 aaKnown RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SNHG28P0DPA3 235 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZBTB48P10074 688 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PDHBP11177 359 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 BCRP11274 1271 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 RARGP13631 454 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 KRT13P13646 458 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TNFAIP3P21580 790 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYP3A7P24462 503 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 RFC5P40937 340 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SKIV2L2P42285 1042 aaKnown RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 BTDP43251 543 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 GALCP54803 685 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC12A3P55017 1021 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP11AP98196 1134 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 POU5F1Q01860 360 aaKnown RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CAV1Q03135 178 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF543Q08ER8 600 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CALCOCO2Q13137 446 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PRPF4BQ13523 1007 aaKnown RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF268Q14587 947 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPP2R5AQ15172 486 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDB1Q16531 1140 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TMEM259Q4ZIN3 620 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCDC38Q502W7 563 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TCERG1LQ5VWI1 586 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 HIBCHQ6NVY1 386 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L2Q6R6M4 530 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 EPM2AIP1Q7L775 607 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 HS2ST1Q7LGA3 356 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 KCNK18Q7Z418 384 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDX42Q86XP3 938 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 JAMLQ86YT9 394 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAPKAPK5Q8IW41 473 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CEP120Q8N960 986 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SYT2Q8N9I0 419 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CFAP61Q8NHU2 1237 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 DYDC1Q8WWB3 177 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 HAS1Q92839 578 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 CEP95Q96GE4 821 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM20AQ96MK3 541 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 SERPINB12Q96P63 405 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF317Q96PQ6 595 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 RPS6KC1Q96S38 1066 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRIM6Q9C030 488 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 WNT8AQ9H1J5 351 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZHX3Q9H4I2 956 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 PSTPIP2Q9H939 334 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 EBF2Q9HAK2 575 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 KCNMB3Q9NPA1 279 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 OLFML3Q9NRN5 406 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZDHHC18Q9NUE0 388 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP40Q9NVE5 1235 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 MTMR4Q9NYA4 1195 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
HMGB3P16-201ENST00000508037 ANKIB1Q9P2G1 1089 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms