RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 C9orf118A6NHY6 69 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 CCDC154A6NI56 674 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 BTBD11A6QL63 1104 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 ERC2O15083 957 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 HTRA2O43464 458 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 PDCP20941 246 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 CTSSP25774 331 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 MRE11P49959 708 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 TBX4P57082 545 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 PPP3CAQ08209 521 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 ADAM15Q13444 863 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 USP10Q14694 798 aaKnown RBP5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 NOMO1Q15155 1222 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 UBE3CQ15386 1083 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZNF827Q17R98 1081 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 ARHGAP29Q52LW3 1261 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 ATAT1Q5SQI0 421 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 GJC2Q5T442 439 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 USP45Q70EL2 814 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 TAS1R1Q7RTX1 841 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 CATIPQ7Z7H3 387 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 CLEC14AQ86T13 490 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 LINC01356Q8N9X3 169 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 DPF2Q92785 391 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 LPPQ93052 612 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 HPS3Q969F9 1004 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 LCORQ96JN0 433 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 GTPBP4Q9BZE4 634 aaKnown RBP5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 SLC12A5Q9H2X9 1139 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 DMRT3Q9NQL9 472 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 FAM184BQ9ULE4 1060 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 LIMCH1Q9UPQ0 1083 aa5.26□□□□□ -1.57
HMGB1P28-201ENST00000507778 VSTM5A8MXK1 200 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 AKR1B10O60218 316 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 NUAK1O60285 661 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 PRAMEF4O60810 478 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 DTNBO60941 627 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 PHF2O75151 1096 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 CAND2O75155 1236 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 TMEM127O75204 238 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZNF888P0CJ79 500 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 EDNRBP24530 442 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 CSF2RBP32927 897 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 GNALP38405 381 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 RRADP55042 308 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 HLTFQ14527 1009 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 VMACQ2NL98 169 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 C19orf54Q5BKX5 351 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 LILRA6Q6PI73 481 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 ABHD15Q6UXT9 468 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 TP53I13Q8NBR0 393 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 PLA2G15Q8NCC3 412 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 PIK3C3Q8NEB9 887 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 SNX33Q8WV41 574 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 GCDHQ92947 438 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 HDAC10Q969S8 669 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 MAP3K14Q99558 947 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 OR10A2Q9H208 303 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 OBP2AQ9NY56 170 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 IPPQ9Y573 584 aa5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 CTDP1Q9Y5B0 961 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P28-201ENST00000507778 C2orf78A6NCI8 922 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 FAM171A2A8MVW0 826 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 CTNND1O60716 968 aaKnown RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 ADSLP30566 484 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 MGAT2Q10469 447 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZNF267Q14586 743 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZMAT1Q5H9K5 638 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 AGBL4Q5VU57 503 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 TCERG1LQ5VWI1 586 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 CIAPIN1Q6FI81 312 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 B3GNT9Q6UX72 402 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 USP30Q70CQ3 517 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 MIGA2Q7L4E1 593 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 GPR155Q7Z3F1 870 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZNF761Q86XN6 746 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 DGKHQ86XP1 1220 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 GRAMD1CQ8IYS0 662 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 PRR18Q8N4B5 295 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 MVB12AQ96EY5 273 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 TAAR9Q96RI9 348 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 C7orf25Q9BPX7 421 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 KIAA1683Q9H0B3 1180 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 C14orf93Q9H972 538 aaKnown RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 PRDM11Q9NQV5 511 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 PTPN22Q9Y2R2 807 aa5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 RBM8AQ9Y5S9 174 aaKnown RBP5.24□□□□□ -1.57
HMGB1P28-201ENST00000507778 MROH6A6NGR9 719 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 ALDH1A2O94788 518 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 RPLP2P05387 115 aaKnown RBP5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 KIR2DL3P43628 341 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 SLURP1P55000 103 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 KIAA2012Q0VF49 1180 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 PGS1Q32NB8 556 aa5.23□□□□□ -1.57
HMGB1P28-201ENST00000507778 C3orf36Q3SXR2 165 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms