RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ADAM15Q13444 863 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 GTF2H3Q13889 308 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 GALEQ14376 348 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 SEPT2Q15019 361 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 PCOLCEQ15113 449 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 KCNA10Q16322 511 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 VMACQ2NL98 169 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 UAP1L1Q3KQV9 507 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 ATAT1Q5SQI0 421 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 MCTP2Q6DN12 878 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 ABHD15Q6UXT9 468 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 GPR155Q7Z3F1 870 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 CLEC14AQ86T13 490 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 GLB1L2Q8IW92 636 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 REXO1L1PQ8IX06 675 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 CARFQ8N187 725 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 MIER2Q8N344 545 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 PRR18Q8N4B5 295 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 TXNDC5Q8NBS9 432 aaKnown RBP4.53□□□□□ -1.68
LSM6-205ENST00000507449 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 RIN2Q8WYP3 895 aaPredicted RBP4.53□□□□□ -1.68
LSM6-205ENST00000507449 DPF2Q92785 391 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 FATE1Q969F0 183 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 HPS3Q969F9 1004 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 CLIP3Q96DZ5 547 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 TAAR9Q96RI9 348 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 CSRNP2Q9H175 543 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 GREM2Q9H772 168 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 SLC52A1Q9NWF4 448 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 OBP2AQ9NY56 170 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 NTMQ9P121 344 aa4.53□□□□□ -1.68
LSM6-205ENST00000507449 DDX20Q9UHI6 824 aaKnown RBP4.53□□□□□ -1.68
LSM6-205ENST00000507449 CCDC154A6NI56 674 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 NPIPB6E9PJ23 425 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 KIF3BO15066 747 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 PRC1O43663 620 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 AP1G1O43747 822 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 INHBBP09529 407 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 GSPT1P15170 499 aaKnown RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 VCAM1P19320 739 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 PDCP20941 246 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 MRE11P49959 708 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 AFF3P51826 1226 aaKnown RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 NRG3P56975 720 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 MGAT2Q10469 447 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 TBR1Q16650 682 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 MUM1L1Q5H9M0 696 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 IFIT1BQ5T764 474 aaKnown RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 KLHDC10Q6PID8 442 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 Q6ZVL8 140 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 USP45Q70EL2 814 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 ZNF761Q86XN6 746 aaPredicted RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 IFNL2Q8IZJ0 200 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 UNC5BQ8IZJ1 945 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 SLC35G2Q8TBE7 412 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 GEMIN8Q9NWZ8 242 aaKnown RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 ADAM29Q9UKF5 820 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 DNM3Q9UQ16 869 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 VWA7Q9Y334 891 aa4.52□□□□□ -1.69
LSM6-205ENST00000507449 CTDP1Q9Y5B0 961 aaPredicted RBP4.52□□□□□ -1.69
LSM6-205ENST00000507449 A6NNZ2 444 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 RFXAPO00287 272 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 FSBPO95073 299 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 LTA4HP09960 611 aaKnown RBP4.51□□□□□ -1.69
LSM6-205ENST00000507449 SLC6A9P48067 706 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 RRADP55042 308 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ADAM8P78325 824 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 IL10RAQ13651 578 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 GRM3Q14832 879 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ACAP1Q15027 740 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 UBE3CQ15386 1083 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 MST1LQ2TV78 715 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 GFOD2Q3B7J2 385 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 MINDY4Q4G0A6 757 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ZNF385BQ569K4 471 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 FAM26FQ5R3K3 315 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 AGBL4Q5VU57 503 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 CYB5RLQ6IPT4 315 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 LMBR1LQ6UX01 489 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 TAS1R1Q7RTX1 841 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 RTKN2Q8IZC4 609 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ZDHHC14Q8IZN3 488 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 KLHL36Q8N4N3 616 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 LILRA3Q8N6C8 439 aaPredicted RBP4.51□□□□□ -1.69
LSM6-205ENST00000507449 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.51□□□□□ -1.69
LSM6-205ENST00000507449 DIS3LQ8TF46 1054 aaKnown RBP4.51□□□□□ -1.69
LSM6-205ENST00000507449 TIFAQ96CG3 184 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 ADI1Q9BV57 179 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 CARD11Q9BXL7 1154 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 TMEM168Q9H0V1 697 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 NMRK2Q9NPI5 230 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 RBM12Q9NTZ6 932 aaKnown RBP4.51□□□□□ -1.69
LSM6-205ENST00000507449 INTUQ9ULD6 942 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 SIK3Q9Y2K2 1263 aa4.51□□□□□ -1.69
LSM6-205ENST00000507449 CCDC194A0A1B0GVG4 234 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 WNT10BO00744 389 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 OFD1O75665 1012 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms