RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 TBX20Q9UMR3 447 aa11.73□□□□□ -0.53
TRIM6-209ENST00000507320 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
TRIM6-209ENST00000507320 PDE4DIPQ5VU43 2346 aa11.73□□□□□ -0.53
TRIM6-209ENST00000507320 RANBP2P49792 3224 aaKnown RBP11.73□□□□□ -0.53
TRIM6-209ENST00000507320 TISP43B9A030 160 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 RPS6KA5O75582 802 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PRKCBP05771 671 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PRCPP42785 496 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 EFNA5P52803 228 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 MAPK6Q16659 721 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 DPCR1Q3MIW9 517 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 NELFCDQ8IXH7 590 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 ZNF507Q8TCN5 953 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 ZMYM2Q9UBW7 1377 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 KCNG1Q9UIX4 513 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 ZMYND8Q9ULU4 1186 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PADI3Q9ULW8 664 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 TSPAN1O60635 241 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 CAPN15O75808 1086 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 CSF2RAP15509 400 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 RBM10P98175 930 aaKnown RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 NFX1Q12986 1120 aaKnown RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 TCTN1Q2MV58 587 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 L1TD1Q5T7N2 865 aaKnown RBP11.72□□□□□ -0.53
TRIM6-209ENST00000507320 TSHZ1Q6ZSZ6 1077 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 DEFB128Q7Z7B8 93 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
TRIM6-209ENST00000507320 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 H0YCG3 227 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 ACKR2O00590 384 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 EIF3DO15371 548 aaKnown RBP eCLIP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 ARF4P18085 180 aaPredicted RBP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 PAK2Q13177 524 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 FAM187BQ17R55 369 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 MFSD5Q6N075 450 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 SLC39A4Q6P5W5 647 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 MYOCDQ8IZQ8 938 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 BADQ92934 168 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 TARS2Q9BW92 718 aaKnown RBP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 IFIH1Q9BYX4 1025 aaKnown RBP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 TMX1Q9H3N1 280 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 PRMT7Q9NVM4 692 aaPredicted RBP11.71□□□□□ -0.54
TRIM6-209ENST00000507320 PRKAG2Q9UGJ0 569 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 SQORQ9Y6N5 450 aa11.71□□□□□ -0.54
TRIM6-209ENST00000507320 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ANKRD63C9JTQ0 380 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 TGFB1I1O43294 461 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 MGEA5O60502 916 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ERLIN2O94905 339 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 CXCL10P02778 98 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 NLRP12P59046 1061 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 STRN3Q13033 797 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ALCAMQ13740 583 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 PLEKHG4Q58EX7 1191 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 SASS6Q6UVJ0 657 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ADSSL1Q8N142 457 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 GUF1Q8N442 669 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ZBTB45Q96K62 511 aaPredicted RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 PRIMPOLQ96LW4 560 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ACCSQ96QU6 501 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 ACO2Q99798 780 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 KCTD10Q9H3F6 313 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 AGPAT5Q9NUQ2 364 aa11.7□□□□□ -0.54
TRIM6-209ENST00000507320 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
TRIM6-209ENST00000507320 GPR182O15218 404 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 PMS1P54277 932 aaKnown RBP11.69□□□□□ -0.54
TRIM6-209ENST00000507320 TYRO3Q06418 890 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
TRIM6-209ENST00000507320 COBLL1Q53SF7 1204 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 EEF1DP3Q658K8 133 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 KLHL10Q6JEL2 608 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 STXBP4Q6ZWJ1 553 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 MED15Q96RN5 788 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 MRPL4Q9BYD3 311 aaKnown RBP11.69□□□□□ -0.54
TRIM6-209ENST00000507320 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
TRIM6-209ENST00000507320 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms