RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DENND3A2RUS2 1198 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 LRRIQ4A6NIV6 560 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ZBTB39O15060 712 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 TOM1L1O75674 476 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 SSBP05455 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 GHRP10912 638 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ITGB8P26012 769 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 NDUFA8P51970 172 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 CCL23P55773 120 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 MBTD1Q05BQ5 628 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 EHHADHQ08426 723 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 GPNMBQ14956 572 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 NT5DC1Q5TFE4 455 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 FAM109BQ6ICB4 259 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 SLC27A1Q6PCB7 646 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ZNF720Q7Z2F6 126 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 MRPL10Q7Z7H8 261 aaKnown RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 FAM228AQ86W67 206 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 MAP4K3Q8IVH8 894 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 CD302Q8IX05 232 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM161BQ8NDZ6 487 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 DBF4BQ8NFT6 615 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 SPATA20Q8TB22 786 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 TOP1MTQ969P6 601 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 DHX58Q96C10 678 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 NLRP4Q96MN2 994 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 OSMRQ99650 979 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 KIAA1586Q9HCI6 787 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 NOC2LQ9Y3T9 749 aaKnown RBP9.31□□□□□ -0.92
PDGFC-205ENST00000506880 INSL6Q9Y581 213 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 PCDHA11Q9Y5I1 949 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 A0A1B0GVL5 298 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 MYMKA6NI61 221 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 C9IYK1 514 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 INO80B-WBP1J3KQ70 363 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PPP1R37O75864 691 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 LDHAP00338 332 aaKnown RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PRKCBP05771 671 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 CTSHP09668 335 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 SRGAP2CP0DJJ0 459 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PEX3P56589 373 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 HTRA4P83105 476 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 DRP2Q13474 957 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PRPF4BQ13523 1007 aaKnown RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 SNW1Q13573 536 aaKnown RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 NFIL3Q16649 462 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 AMHR2Q16671 573 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 BMT2Q1RMZ1 405 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 HAUS6Q7Z4H7 955 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 CMTR2Q8IYT2 770 aaKnown RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 CRIPAKQ8N1N5 446 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 MYCT1Q8N699 235 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PDILTQ8N807 584 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PAGE5Q96GU1 130 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 SCLYQ96I15 445 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 RAD9AQ99638 391 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 STRA6Q9BX79 667 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PLEKHA5Q9HAU0 1116 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 PANK4Q9NVE7 773 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 GIT1Q9Y2X7 761 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 STYXL1Q9Y6J8 313 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 FNDC1Q4ZHG4 1894 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-205ENST00000506880 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
PDGFC-205ENST00000506880 A0A087X0B3 334 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 FSD2A1L4K1 749 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM150BA6NC51 233 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 ENPP3O14638 875 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 GJB5O95377 273 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 MCF2P10911 925 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 SYN1P17600 705 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 GARTP22102 1010 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 PROZP22891 400 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 HOXA11P31270 313 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 CD52P31358 61 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 ASIC1P78348 528 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 MDM2Q00987 491 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 SKOR2Q2VWA4 1001 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 FOXD4L6Q3SYB3 417 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 HERC4Q5GLZ8 1057 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 SPECC1Q5M775 1068 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 FAM26FQ5R3K3 315 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 TWF2Q6IBS0 349 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 FOXD4L3Q6VB84 417 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 C16orf59Q7L2K0 433 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms