RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
SCLT1-208ENST00000506368 AP1G2O75843 785 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 DCTN3O75935 186 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 TPBGLP0DKB5 382 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 VCAM1P19320 739 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 YARSP54577 528 aaKnown RBP17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SH3BGRP55822 239 aaPredicted RBP17.09■□□□□ 0.33
SCLT1-208ENST00000506368 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 RBBP8NLQ8NC74 664 aaPredicted RBP17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SLC35G2Q8TBE7 412 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 ASAP3Q8TDY4 903 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SCFD1Q8WVM8 642 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCLT1-208ENST00000506368 RGL1Q9NZL6 768 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 NRXN2Q9P2S2 1712 aa17.09■□□□□ 0.33
SCLT1-208ENST00000506368 A8MUI8 341 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 KLRF2D3W0D1 207 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 TRAFD1O14545 582 aaPredicted RBP17.08■□□□□ 0.33
SCLT1-208ENST00000506368 PEX11AO75192 247 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 NR2F2P24468 414 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.33
SCLT1-208ENST00000506368 EPHA7Q15375 998 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.33
SCLT1-208ENST00000506368 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.33
SCLT1-208ENST00000506368 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.33
SCLT1-208ENST00000506368 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 MTUS1Q9ULD2 1270 aa17.08■□□□□ 0.33
SCLT1-208ENST00000506368 ANKRD31Q8N7Z5 1873 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 PDXKO00764 312 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 RGL2O15211 777 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 KRT13P13646 458 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 SLC9A1P19634 815 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 STX2P32856 288 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 RPL21P46778 160 aaKnown RBP17.08■□□□□ 0.32
SCLT1-208ENST00000506368 RAD23BP54727 409 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 CALCOCO2Q13137 446 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
SCLT1-208ENST00000506368 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 C12orf60Q5U649 245 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 TGS1Q96RS0 853 aaKnown RBP17.08■□□□□ 0.32
SCLT1-208ENST00000506368 DCLRE1BQ9H816 532 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 WDR35Q9P2L0 1181 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 STOML1Q9UBI4 398 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-208ENST00000506368 STARD13Q9Y3M8 1113 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 PCDHA3Q9Y5H8 950 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 USH1CQ9Y6N9 552 aa17.08■□□□□ 0.32
SCLT1-208ENST00000506368 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
SCLT1-208ENST00000506368 ADGRA3Q8IWK6 1321 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 ANKRD62A6NC57 917 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 TSPY3P0CV98 308 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 TSPY8P0CW00 308 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 POLD1P28340 1107 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 POLGP54098 1239 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-208ENST00000506368 CAV1Q03135 178 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 PPP1R18Q6NYC8 613 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 VSTM1Q6UX27 236 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 DNAJC9Q8WXX5 260 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 SLCO2A1Q92959 643 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 RPS6KC1Q96S38 1066 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 CCDC28BQ9BUN5 200 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 FAM192AQ9GZU8 254 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 WHRNQ9P202 907 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 LRCH1Q9Y2L9 728 aa17.07■□□□□ 0.32
SCLT1-208ENST00000506368 MAPK13O15264 365 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 MAGEB2O15479 319 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 SEL1L2Q5TEA6 688 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 RIBC1Q8N443 379 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 GLG1Q92896 1179 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 LGALS13Q9UHV8 139 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 NR2E1Q9Y466 385 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 SOX5P35711 763 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 SLC18A1P54219 525 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 IL9RQ01113 521 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 HERC4Q5GLZ8 1057 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 RGS9BPQ6ZS82 235 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 SYDE1Q6ZW31 735 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-208ENST00000506368 ARHGAP18Q8N392 663 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 ZNF384Q8TF68 577 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 SCOCQ9UIL1 159 aa17.06■□□□□ 0.32
SCLT1-208ENST00000506368 ECE2O60344 883 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 ACTN1P12814 892 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 RFX1P22670 979 aa17.05■□□□□ 0.32
SCLT1-208ENST00000506368 CDC25CP30307 473 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms