RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SQORQ9Y6N5 450 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 ZMYM2Q9UBW7 1377 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 KIAA1671Q9BY89 1806 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 BICDL2A1A5D9 508 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 DENND3A2RUS2 1198 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 ACKR2O00590 384 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 TLR3O15455 904 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 TGFB1I1O43294 461 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 PTMAP06454 111 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 SRGAP2CP0DJJ0 459 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 PHKA2P46019 1235 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 ZNF165P49910 485 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 CRYBB1P53674 252 aaPredicted RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 PMS1P54277 932 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 MBTD1Q05BQ5 628 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 LRRC63Q05C16 580 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 KCNA1Q09470 495 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 PAK1Q13153 545 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 NCAPHQ15003 741 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 AMHR2Q16671 573 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 EDRF1Q3B7T1 1238 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 ZCWPW2Q504Y3 356 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 TTI2Q6NXR4 508 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 NECAB2Q7Z6G3 386 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 ZBTB8OSQ8IWT0 167 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 DHX40Q8IX18 779 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 C12orf56Q8IXR9 622 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 ZC3H3Q8IXZ2 948 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 CAGE1Q8TC20 777 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 FAM200AQ8TCP9 573 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 DIS3LQ8TF46 1054 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 NELFBQ8WX92 580 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 PRIMPOLQ96LW4 560 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 KIFC3Q9BVG8 833 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 CELF4Q9BZC1 486 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 GCOM2Q9BZD3 368 aaPredicted RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 INO80BQ9C086 356 aaPredicted RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 FAM49AQ9H0Q0 323 aaPredicted RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 TRPV6Q9H1D0 765 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 C11orf49Q9H6J7 331 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 MINDY3Q9H8M7 445 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 CDHR5Q9HBB8 845 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 CBX8Q9HC52 389 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 TRMT13Q9NUP7 481 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 TYW1Q9NV66 732 aaKnown RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 PRMT7Q9NVM4 692 aaPredicted RBP7.91□□□□□ -1.14
NUP54-204ENST00000506098 PRDM4Q9UKN5 801 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 EXOC7Q9UPT5 735 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 STYXL1Q9Y6J8 313 aa7.91□□□□□ -1.14
NUP54-204ENST00000506098 SMTNL1A8MU46 457 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 PITPNM1O00562 1244 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 CALUO43852 315 aaPredicted RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 CHRNA1P02708 482 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 EDN1P05305 212 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 IQCF3P0C7M6 154 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 CKBP12277 381 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 DARSP14868 501 aaKnown RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 PROZP22891 400 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 EIF4BP23588 611 aaKnown RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 AXLP30530 894 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 MYBPC2Q14324 1141 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 MAPK6Q16659 721 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 KIZQ2M2Z5 673 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 SPATA1Q5VX52 437 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 ANKRD40Q6AI12 368 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 KLHL10Q6JEL2 608 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 SLC39A4Q6P5W5 647 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 ZPBP2Q6X784 338 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 SLC9A9Q8IVB4 645 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 CCDC155Q8N6L0 562 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 GOLGA5Q8TBA6 731 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 NLRP7Q8WX94 980 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 NLRP4Q96MN2 994 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 ACO2Q99798 780 aaKnown RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 DUSP9Q99956 384 aaKnown RBP7.9□□□□□ -1.14
NUP54-204ENST00000506098 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 DMAC2Q9NW81 257 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 CTNND2Q9UQB3 1225 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 TRPV2Q9Y5S1 764 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 CDY2AQ9Y6F7 541 aa7.9□□□□□ -1.14
NUP54-204ENST00000506098 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.15
NUP54-204ENST00000506098 CNTNAP2Q9UHC6 1331 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 FSD2A1L4K1 749 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 TRIM49BA6NDI0 452 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 DCDC2CA8MYV0 355 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 ANKRD63C9JTQ0 380 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 INO80B-WBP1J3KQ70 363 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 M0QZ92 97 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 ABLIM1O14639 778 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 KIAA0391O15091 583 aaKnown RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 PRKCBP05771 671 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 EN2P19622 333 aaPredicted RBP7.89□□□□□ -1.15
NUP54-204ENST00000506098 GARTP22102 1010 aa7.89□□□□□ -1.15
NUP54-204ENST00000506098 THPOP40225 353 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms