RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 TECP42680 631 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPNE4-206ENST00000505957 CRYBB1P53674 252 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-206ENST00000505957 NLRP12P59046 1061 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 FOXK2Q01167 660 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 E2F4Q16254 413 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 IL17AQ16552 155 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 LETM2Q2VYF4 491 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 LONRF3Q496Y0 759 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 ANO6Q4KMQ2 910 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 ZNF484Q5JVG2 852 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 SYCE2Q6PIF2 218 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 ABHD15Q6UXT9 468 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 TRIML1Q8N9V2 468 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 TMEM40Q8WWA1 233 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-206ENST00000505957 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 ANO3Q9BYT9 981 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 CDHR5Q9HBB8 845 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 NR2E1Q9Y466 385 aa11.93□□□□□ -0.5
CPNE4-206ENST00000505957 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
CPNE4-206ENST00000505957 CIITAP33076 1130 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 PPM1AP35813 382 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 SREBF1P36956 1147 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 DSC3Q14574 896 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 POSTNQ15063 836 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 CT47A1Q5JQC4 288 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-206ENST00000505957 NIPA1Q7RTP0 329 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 UBALD2Q8IYN6 164 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 IGSF22Q8N9C0 903 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 IQUBQ8NA54 791 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 RNF214Q8ND24 703 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 EPSTI1Q96J88 318 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 TCF25Q9BQ70 676 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 NAT10Q9H0A0 1025 aaKnown RBP11.92□□□□□ -0.5
CPNE4-206ENST00000505957 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
CPNE4-206ENST00000505957 KMT2EQ8IZD2 1858 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZFHX2Q9C0A1 2572 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 A0A087X0B3 334 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZBTB42B2RXF5 422 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 BACH1O14867 736 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 TBX3O15119 743 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 GPR32O75388 356 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 CCNE2O96020 404 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 MYL1P05976 194 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 CYP3A4P08684 503 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 FGFR1P11362 822 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 IBSPP21815 317 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZNF165P49910 485 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 KRT17Q04695 432 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ITIH3Q06033 890 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 PDIA5Q14554 519 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 IQCB1Q15051 598 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZRSR1Q15695 479 aaKnown RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 SPECC1Q5M775 1068 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 PLPP4Q5VZY2 271 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 KCNT2Q6UVM3 1135 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 USP49Q70CQ1 688 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 CCDC60Q8IWA6 550 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-206ENST00000505957 CASP10Q92851 521 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 DISC1Q9NRI5 854 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 FAM86C1Q9NVL1 165 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 HCSTQ9UBK5 93 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 SORCS3Q9UPU3 1222 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
CPNE4-206ENST00000505957 HIDE1A8MVS5 230 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
CPNE4-206ENST00000505957 SMC2O95347 1197 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 C22orf31O95567 290 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 MTMR3Q13615 1198 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 CALCRLQ16602 461 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 KIZQ2M2Z5 673 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 Q4G0T1 1027 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 HS1BP3Q53T59 392 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 MIS18BP1Q6P0N0 1132 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 PDXDC2PQ6P474 469 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 LRRC55Q6ZSA7 311 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 KREMEN2Q8NCW0 462 aa11.9□□□□□ -0.5
CPNE4-206ENST00000505957 ZNF558Q96NG5 402 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms