RNA–Protein interactions for RNA: ENST00000505857.2

TOP1MT-202, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 1 (best)

Gene TOP1MT, Length 2,029 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-202ENST00000505857 TGFB1I1O43294 461 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 CLCN3P51790 818 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 PPFIA1Q13136 1202 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 GRIK4Q16099 956 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 LHX8Q68G74 356 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 CCSAPQ6IQ19 270 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 FOXR2Q6PJQ5 311 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 CREBRFQ8IUR6 639 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 LINC01465Q8N7H1 131 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 IQCDQ96DY2 449 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 DNAJC7Q99615 494 aa18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 ARGLU1Q9NWB6 273 aaPredicted RBP18.18■□□□□ 0.5
TOP1MT-202ENST00000505857 SMIM10L2AP0DMW4 78 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 SMIM10L2BP0DMW5 78 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 RTP1P59025 263 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 KNOP1Q1ED39 458 aaKnown RBP18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 ARHGAP29Q52LW3 1261 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 TAS1R3Q7RTX0 852 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 OR8K1Q8NGG5 319 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 ZNF668Q96K58 619 aaPredicted RBP18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 TUBGCP2Q9BSJ2 902 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
TOP1MT-202ENST00000505857 TISP43B9A030 160 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 MAPTP10636 758 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 GTF2BQ00403 316 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 CAPSQ13938 189 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 MTHFD1LQ6UB35 978 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 METTL13Q8N6R0 699 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 SPIRE2Q8WWL2 714 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 CNOT6LQ96LI5 555 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 KMT5AQ9NQR1 393 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 USP20Q9Y2K6 914 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 LUC7L2Q9Y383 392 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 PPME1Q9Y570 386 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 TRIP12Q14669 1992 aaPredicted RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 DMP1Q13316 513 aaPredicted RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 TSR1Q2NL82 804 aaKnown RBP18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 ST6GALNAC4Q9H4F1 302 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 C17orf75Q9HAS0 396 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 LZTFL1Q9NQ48 299 aa18.16■□□□□ 0.5
TOP1MT-202ENST00000505857 TTC26A0AVF1 554 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 FGFR1OPO95684 399 aaKnown RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 MYCP01106 439 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 KCNA10Q16322 511 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 BRDTQ58F21 947 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 FIGNQ5HY92 759 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 IER5Q5VY09 327 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 LRRC55Q6ZSA7 311 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 HMX1Q9NP08 348 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 PCDHB13Q9Y5F0 798 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 COL1A2P08123 1366 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 DENND3A2RUS2 1198 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 RNF225M0QZC1 329 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 ASGR1P07306 291 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 ADAM17P78536 824 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 LAMTOR4Q0VGL1 99 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 ACRBPQ8NEB7 543 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 TTYH3Q9C0H2 523 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 HDAC6Q9UBN7 1215 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 TRAF3IP3Q9Y228 551 aa18.15■□□□□ 0.5
TOP1MT-202ENST00000505857 SCN10AQ9Y5Y9 1956 aa18.14■□□□□ 0.5
TOP1MT-202ENST00000505857 SPDYE4A6NLX3 237 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 CLIC2O15247 247 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 EDN1P05305 212 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 NAMPTP43490 491 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 LRRC63Q05C16 580 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 MTFR1Q15390 333 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 MEA1Q16626 185 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 IFT74Q96LB3 600 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 UNC93B1Q9H1C4 597 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 SPC25Q9HBM1 224 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 TBX20Q9UMR3 447 aa18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 EPN1Q9Y6I3 576 aaPredicted RBP18.14■□□□□ 0.49
TOP1MT-202ENST00000505857 GRIN2DO15399 1336 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 LRRIQ4A6NIV6 560 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 PES1O00541 588 aaKnown RBP18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 NDUFA10O95299 355 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 SRGAP2CP0DJJ0 459 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 MTIF2P46199 727 aaKnown RBP18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 SMTNP53814 917 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 RSRC2Q7L4I2 434 aaKnown RBP18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
TOP1MT-202ENST00000505857 PPP1R16BQ96T49 567 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms