RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 MRPL9Q9BYD2 267 aaKnown RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 CWH43Q9H720 699 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PRMT7Q9NVM4 692 aaPredicted RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PLAGL2Q9UPG8 496 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PCDHB2Q9Y5E7 798 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 REV3LO60673 3130 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 GRM6O15303 877 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-203ENST00000505756 UBA7P41226 1012 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 FAM187BQ17R55 369 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 GLB1LQ6UWU2 654 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 MRPL10Q7Z7H8 261 aaKnown RBP12.61□□□□□ -0.39
KDM3B-203ENST00000505756 COLGALT1Q8NBJ5 622 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 LEO1Q8WVC0 666 aaPredicted RBP12.61□□□□□ -0.39
KDM3B-203ENST00000505756 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
KDM3B-203ENST00000505756 LPPQ93052 612 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 CSRNP2Q9H175 543 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 FZD8Q9H461 694 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 ALG13Q9NP73 1137 aaKnown RBP12.61□□□□□ -0.39
KDM3B-203ENST00000505756 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 HCSTQ9UBK5 93 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 CNTNAP2Q9UHC6 1331 aa12.61□□□□□ -0.39
KDM3B-203ENST00000505756 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 B4GALT5O43286 388 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 ITGB1P05556 798 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
KDM3B-203ENST00000505756 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 EFNA5P52803 228 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 UBE3AQ05086 875 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 GRIN1Q05586 938 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 MAPK6Q16659 721 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 SLC27A1Q6PCB7 646 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 SYT2Q8N9I0 419 aaPredicted RBP12.6□□□□□ -0.39
KDM3B-203ENST00000505756 LINC00301Q8NCQ3 95 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 SPPL3Q8TCT6 385 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 CPB2Q96IY4 423 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 PLIN2Q99541 437 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 TRIM6Q9C030 488 aaPredicted RBP12.6□□□□□ -0.39
KDM3B-203ENST00000505756 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 NSUN3Q9H649 340 aaKnown RBP12.6□□□□□ -0.39
KDM3B-203ENST00000505756 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 COG5Q9UP83 839 aa12.6□□□□□ -0.39
KDM3B-203ENST00000505756 PRRC2BQ5JSZ5 2229 aaKnown RBP12.6□□□□□ -0.39
KDM3B-203ENST00000505756 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 CARNS1A5YM72 827 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 MEIS3P2A8K0S8 358 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 ACKR2O00590 384 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 HIP1RO75146 1068 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PPP6R2O75170 966 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 OFD1O75665 1012 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 FGF18O76093 207 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 ITGA4P13612 1032 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 MARCKSP29966 332 aaPredicted RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PPM1AP35813 382 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 SLC12A3P55017 1021 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 CEBPZQ03701 1054 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 DMP1Q13316 513 aaPredicted RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PRPF4BQ13523 1007 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 CAMK1Q14012 370 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 SLC39A14Q15043 492 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 LONRF3Q496Y0 759 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 KCNT2Q6UVM3 1135 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 AGMOQ6ZNB7 445 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 THNSL1Q8IYQ7 743 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 HACE1Q8IYU2 909 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 DAW1Q8N136 415 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 SMG8Q8ND04 991 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 RASSF8Q8NHQ8 419 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 URGCPQ8TCY9 931 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 POF1BQ8WVV4 589 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 HLA-CQ95604 372 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 RSAD1Q9HA92 442 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 POLD4Q9HCU8 107 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms