RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ARL2P36404 184 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 PSEN2P49810 448 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 GJA9P57773 515 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 KCNA1Q09470 495 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 DRP2Q13474 957 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 ADGRE1Q14246 886 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 KIAA0753Q2KHM9 967 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 AAK1Q2M2I8 961 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 IER5Q5VY09 327 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 FOXR2Q6PJQ5 311 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 LRRC55Q6ZSA7 311 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 HS2ST1Q7LGA3 356 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 DRC7Q8IY82 874 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 RETREG2Q8NC44 543 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 PSPC1Q8WXF1 523 aaKnown RBP10.26□□□□□ -0.77
TPM3-218ENST00000505010 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 ZBTB10Q96DT7 871 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 EEF2KMTQ96G04 330 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 NECAB3Q96P71 396 aaPredicted RBP10.26□□□□□ -0.77
TPM3-218ENST00000505010 ACCSQ96QU6 501 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 UPF3AQ9H1J1 476 aaKnown RBP10.26□□□□□ -0.77
TPM3-218ENST00000505010 ST6GALNAC4Q9H4F1 302 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 TAB2Q9NYJ8 693 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
TPM3-218ENST00000505010 MSRAQ9UJ68 235 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 SCN10AQ9Y5Y9 1956 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 ADGRA3Q8IWK6 1321 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 IGKV6-21A0A0C4DH24 114 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 A0A1W2PQ45 241 aaPredicted RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 A0A1W2PQY0 241 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 MAGEB2O15479 319 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 KPNA6O60684 536 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PGK1P00558 417 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 NR3C1P04150 777 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 TPM3P06753 285 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 SMIM10L2BP0DMW5 78 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 NR2F2P24468 414 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 NAMPTP43490 491 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 MTIF2P46199 727 aaKnown RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 DNM2P50570 870 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 CLCN3P51790 818 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 UBASH3AP57075 661 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 GTF2BQ00403 316 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 FKBP3Q00688 224 aaKnown RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 CAPSQ13938 189 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 KRT31Q15323 416 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 EDRF1Q3B7T1 1238 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 CCDC40Q4G0X9 1142 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 TCP11X2Q5H9J9 407 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 GNASQ5JWF2 1037 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 EFCAB12Q6NXP0 572 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 ANKRD33Q7Z3H0 272 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 TMEM161BQ8NDZ6 487 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 GOLGA5Q8TBA6 731 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PPP1R13LQ8WUF5 828 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 KAT2BQ92831 832 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 MRFAP1L1Q96HT8 127 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PDLIM2Q96JY6 352 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PPP1R9BQ96SB3 815 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 MTG1Q9BT17 334 aaPredicted RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 KATNAL1Q9BW62 490 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 STRA6Q9BX79 667 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 GBP3Q9H0R5 595 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 IKZF4Q9H2S9 585 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 TMEM206Q9H813 350 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 SUCLA2Q9P2R7 463 aaPredicted RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 LIMA1Q9UHB6 759 aaKnown RBP10.25□□□□□ -0.77
TPM3-218ENST00000505010 KCNG1Q9UIX4 513 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 EXOC7Q9UPT5 735 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 TRAF3IP3Q9Y228 551 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 PHLPP2Q6ZVD8 1323 aa10.25□□□□□ -0.77
TPM3-218ENST00000505010 RRN3P2A6NIE6 340 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 CETN3O15182 167 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 CLIC2O15247 247 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 TGFB1I1O43294 461 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 ZEB2O60315 1214 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 ADAMTS4O75173 837 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 TPM2P07951 284 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 KLRC1P26715 233 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 CDC25BP30305 580 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 ABCD1P33897 745 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 CYP2J2P51589 502 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 COPB1P53618 953 aaKnown RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 LAMTOR4Q0VGL1 99 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 STRN3Q13033 797 aa10.24□□□□□ -0.77
TPM3-218ENST00000505010 PPIGQ13427 754 aaKnown RBP eCLIP10.24□□□□□ -0.771e-8■□□□□ 8.4
TPM3-218ENST00000505010 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
TPM3-218ENST00000505010 TFDP1Q14186 410 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms