RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 P2RX5Q93086 422 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 TSG101Q99816 390 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 FZD8Q9H461 694 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 TMEM39AQ9NV64 488 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
CYSTM1-202ENST00000504227 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 PDXKO00764 312 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CALUO43852 315 aaPredicted RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CSDE1O75534 798 aaKnown RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 ERLIN2O94905 339 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CLTBP09497 229 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 ZNF165P49910 485 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 LIG4P49917 911 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 FAM187BQ17R55 369 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 NOC4LQ9BVI4 516 aaKnown RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 SQORQ9Y6N5 450 aa15.19■□□□□ 0.02
CYSTM1-202ENST00000504227 HNRNPDLO14979 420 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 GPR182O15218 404 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 RPS6KA5O75582 802 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 PIGRP01833 764 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 IQCF3P0C7M6 154 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 STX17P56962 302 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 LRRC63Q05C16 580 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 FBXO47Q5MNV8 452 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 SLFN12LQ6IEE8 588 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 ZPBP2Q6X784 338 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 BPIFA3Q9BQP9 254 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 TARS2Q9BW92 718 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 KCTD10Q9H3F6 313 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 TYW1Q9NV66 732 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 NOC2LQ9Y3T9 749 aaKnown RBP15.18■□□□□ 0.02
CYSTM1-202ENST00000504227 SMTNL1A8MU46 457 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 GHRP10912 638 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 FGFR4P22455 802 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 RPL13P26373 211 aaKnown RBP15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 AXLP30530 894 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 TPD52L1Q16890 204 aaPredicted RBP15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 ANKRD40Q6AI12 368 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 FOXR2Q6PJQ5 311 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 TMEM40Q8WWA1 233 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 TCHPQ9BT92 498 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 HTATIP2Q9BUP3 242 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 PPP1R12CQ9BZL4 782 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 TBX21Q9UL17 535 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 TRAF3IP3Q9Y228 551 aa15.17■□□□□ 0.02
CYSTM1-202ENST00000504227 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 ANKRD63C9JTQ0 380 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 KIAA0355O15063 1070 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 B4GALT5O43286 388 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TSPAN1O60635 241 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 PMS1P54277 932 aaKnown RBP15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 LPIN1Q14693 890 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 AMHR2Q16671 573 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 EDRF1Q3B7T1 1238 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TRAF7Q6Q0C0 670 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 APBB1IPQ7Z5R6 666 aaPredicted RBP15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 FAM228AQ86W67 206 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 ENOX1Q8TC92 643 aaKnown RBP15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 FAM200AQ8TCP9 573 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 IKZF4Q9H2S9 585 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 PRDM5Q9NQX1 630 aaPredicted RBP15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 AGPAT3Q9NRZ7 376 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 TNFSF13BQ9Y275 285 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 USP20Q9Y2K6 914 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 CNTNAP2Q9UHC6 1331 aa15.16■□□□□ 0.02
CYSTM1-202ENST00000504227 DNAH12Q6ZR08 3092 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 TRIM49BA6NDI0 452 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 BECN2A8MW95 431 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 IKBKBO14920 756 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 N4BP3O15049 544 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 CLIC2O15247 247 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 TOM1L1O75674 476 aa15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 FGFR1OPO95684 399 aaKnown RBP15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
CYSTM1-202ENST00000504227 GARTP22102 1010 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms