RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CCDC92Q53HC0 331 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM47AQ5JRC9 791 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CEP85LQ5SZL2 805 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SHEQ5VZ18 495 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ELMSAN1Q6PJG2 1045 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 INTS8Q75QN2 995 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HS2ST1Q7LGA3 356 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GRAMD1CQ8IYS0 662 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NDUFAF2Q8N183 169 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKLE1Q8NAG6 615 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SMC1BQ8NDV3 1235 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CCT6BQ92526 530 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 EAF2Q96CJ1 260 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 RBM14Q96PK6 669 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 WDR24Q96S15 920 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CIB1Q99828 191 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HEPHQ9BQS7 1158 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ASIC3Q9UHC3 531 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC12A4Q9UP95 1085 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD31Q8N7Z5 1873 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 DDX39AO00148 427 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SUPT3HO75486 399 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ALDH1L1O75891 902 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM13AO94988 1023 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 IFNB1P01574 187 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ASLP04424 464 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PIM1P11309 404 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT5P13647 590 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PFKFB1P16118 471 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CCNFP41002 786 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ZAP70P43403 619 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NDUFA8P51970 172 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 MLLT6P55198 1093 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 LACTBP83111 547 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ITPK1Q13572 414 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HLFQ16534 295 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 Q3C1V9 767 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD20A8PQ5CZ79 823 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SH2D4BQ5SQS7 431 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ZMYM1Q5SVZ6 1142 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NDUFAF5Q5TEU4 345 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP4R3AQ6IN85 833 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 USP43Q70EL4 1123 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 BEND5Q7L4P6 421 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SCUBE1Q8IWY4 988 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NATD1Q8N6N6 113 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GPR161Q8N6U8 529 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 RAB3IL1Q8TBN0 382 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 TEKT4Q8WW24 435 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GATA6Q92908 595 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PTPRN2Q92932 1015 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NOD2Q9HC29 1040 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ABCB6Q9NP58 842 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 DMAP1Q9NPF5 467 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SAMSN1Q9NSI8 373 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HAUS2Q9NVX0 235 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGEF38Q9NXL2 777 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NKIRAS1Q9NYS0 192 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PCOLCE2Q9UKZ9 415 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SNX9Q9Y5X1 595 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD34BA5PLL1 514 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NCAM2O15394 837 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 TSPAN1O60635 241 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 UQCRFS1P1P0C7P4 283 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HMGB2P26583 209 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HOXD13P35453 343 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HSD17B2P37059 387 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CENPAP49450 140 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GRM1Q13255 1194 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PDAP1Q13442 181 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 BIRC3Q13489 604 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SUZ12Q15022 739 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 DPCR1Q3MIW9 517 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GTDC1Q4AE62 458 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC9C1Q4G0N8 1177 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 TNNI3KQ59H18 835 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 TTMPQ5BVD1 217 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 BSPRYQ5W0U4 402 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 C11orf57Q6ZUT1 292 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FBXL16Q8N461 479 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM71BQ8TC56 605 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 EPS8L3Q8TE67 593 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 KIFAP3Q92845 792 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FUBP1Q96AE4 644 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 NR1H4Q96RI1 486 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CLSTN3Q9BQT9 956 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 RTFDC1Q9BY42 306 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PARVGQ9HBI0 331 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 DISC1Q9NRI5 854 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CTNNAL1Q9UBT7 734 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 MTRF1LQ9UGC7 380 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 RASAL2Q9UJF2 1139 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ANGEL1Q9UNK9 670 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PCDHB13Q9Y5F0 798 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PCDHA5Q9Y5H7 936 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 FPGT-TNNI3KV9GXZ4 949 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 KPNA6O60684 536 aa3.93□□□□□ -1.78
PCDH11X-208ENST00000504220 PYGMP11217 842 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms