RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRKD2Q9BZL6 878 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 ADAMTS10Q9H324 1103 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 HEBP1Q9NRV9 189 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 DACT1Q9NYF0 836 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 STK39Q9UEW8 545 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 CDH7Q9ULB5 785 aa14.26□□□□□ -0.13
LSM6-204ENST00000504181 KIF26AQ9ULI4 1882 aaPredicted RBP14.26□□□□□ -0.13
LSM6-204ENST00000504181 NFASCO94856 1347 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 MAFGO15525 162 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 TOP3BO95985 862 aaKnown RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 SOD2P04179 222 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 MX1P20591 662 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 PHKA2P46019 1235 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 FNTBP49356 437 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 NT5C2P49902 561 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 NTHL1P78549 312 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 GLB1LQ6UWU2 654 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 TAS1R1Q7RTX1 841 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 GATA6Q92908 595 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 EVI5LQ96CN4 794 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 HERC2P3Q9BVR0 1158 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 CHRDQ9H2X0 955 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 KCNH7Q9NS40 1196 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 ZDHHC7Q9NXF8 308 aa14.25□□□□□ -0.13
LSM6-204ENST00000504181 MRPS17Q9Y2R5 130 aaKnown RBP14.25□□□□□ -0.13
LSM6-204ENST00000504181 IGKV6D-21A0A0A0MT36 114 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 DDX39AO00148 427 aaKnown RBP14.24□□□□□ -0.13
LSM6-204ENST00000504181 GIPC1O14908 333 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
LSM6-204ENST00000504181 DDHD2O94830 711 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 ATG7O95352 703 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 PAPLNO95428 1278 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 ITGB3BPQ13352 177 aaPredicted RBP14.24□□□□□ -0.13
LSM6-204ENST00000504181 SEC23AQ15436 765 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 SOWAHCQ53LP3 525 aaPredicted RBP14.24□□□□□ -0.13
LSM6-204ENST00000504181 PDXDC2PQ6P474 469 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 GRASPQ7Z6J2 395 aaPredicted RBP14.24□□□□□ -0.13
LSM6-204ENST00000504181 HDAC7Q8WUI4 952 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 SCLT1Q96NL6 688 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 ARRDC1-AS1Q9H2J1 176 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 PLEKHA4Q9H4M7 779 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 ZNF302Q9NR11 478 aa14.24□□□□□ -0.13
LSM6-204ENST00000504181 SHISA7A6NL88 538 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 AXIN1O15169 862 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 GAS2O43903 313 aaKnown RBP14.23□□□□□ -0.13
LSM6-204ENST00000504181 OFD1O75665 1012 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 ATP4AP20648 1035 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 GLUD2P49448 558 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 NOVA1P51513 510 aaKnown RBP14.23□□□□□ -0.13
LSM6-204ENST00000504181 CCR3P51677 355 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 SATB1Q01826 763 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 ZNF252P-AS1Q0IIN9 211 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 UBE2SQ16763 222 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 CEP68Q76N32 757 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 RSPH1Q8WYR4 309 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 FGF13Q92913 245 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 WASF3Q9UPY6 502 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 SSX2IPQ9Y2D8 614 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 FAN1Q9Y2M0 1017 aa14.23□□□□□ -0.13
LSM6-204ENST00000504181 NRP1O14786 923 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 TGM5O43548 720 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 CCNE2O96020 404 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 DARSP14868 501 aaKnown RBP14.22□□□□□ -0.13
LSM6-204ENST00000504181 HEATR6Q6AI08 1181 aaKnown RBP14.22□□□□□ -0.13
LSM6-204ENST00000504181 TWF2Q6IBS0 349 aaKnown RBP14.22□□□□□ -0.13
LSM6-204ENST00000504181 EFCAB12Q6NXP0 572 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 ABHD15Q6UXT9 468 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 KIF12Q96FN5 646 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 MXRA8Q9BRK3 442 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 KRT23Q9C075 422 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
LSM6-204ENST00000504181 PRG3Q9Y2Y8 225 aaPredicted RBP14.22□□□□□ -0.13
LSM6-204ENST00000504181 VWA8A3KMH1 1905 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 ATG2BQ96BY7 2078 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 FREM2Q5SZK8 3169 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 ALDH2P05091 517 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 ZNF806P0C7X5 589 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 KIF5BP33176 963 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 GPC3P51654 580 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 ZNF687Q8N1G0 1237 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 ITFG1Q8TB96 612 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 URGCPQ8TCY9 931 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 FAM193BQ96PV7 902 aaPredicted RBP14.21□□□□□ -0.13
LSM6-204ENST00000504181 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 SMOC1Q9H4F8 434 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 MARCH5Q9NX47 278 aa14.21□□□□□ -0.13
LSM6-204ENST00000504181 PCDHA6Q9UN73 950 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms