RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 UBN1Q9NPG3 1134 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 FAM105AQ9NUU6 356 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 CHMP5Q9NZZ3 219 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 TCHHQ07283 1943 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A087X0B3 334 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 C5orf67F2Z3F1 127 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 INO80B-WBP1J3KQ70 363 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 GAP43P17677 238 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 POU3F3P20264 500 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 ALCAMQ13740 583 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 MCM6Q14566 821 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 SLC27A1Q6PCB7 646 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 CLEC17AQ6ZS10 378 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 APBB1IPQ7Z5R6 666 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 ECHDC2Q86YB7 292 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 TMEM161BQ8NDZ6 487 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 DEPTORQ8TB45 409 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 HVCN1Q96D96 273 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 FIZ1Q96SL8 496 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 PPP1R16BQ96T49 567 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 ZNF576Q9H609 170 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 PCDHB7Q9Y5E2 793 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 GBF1Q92538 1859 aa11.83□□□□□ -0.52
UBE2D3-212ENST00000502563 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 K7ERI5 159 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 N4BP3O15049 544 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 PIGRP01833 764 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 RB1P06400 928 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 ATF7P17544 494 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 ARF4P18085 180 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 PEX3P56589 373 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 ERVK-21P61565 698 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TAP1Q03518 808 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 ZPBP2Q6X784 338 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 DDX12PQ92771 950 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 PLVAPQ9BX97 442 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 MRPL9Q9BYD2 267 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TRIM9Q9C026 710 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 KCNH3Q9ULD8 1083 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 TNFSF13BQ9Y275 285 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
UBE2D3-212ENST00000502563 MYH11P35749 1972 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 MYMKA6NI61 221 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 TRAK2O60296 914 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PPP1R37O75864 691 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 FAM13AO94988 1023 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PRKCBP05771 671 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 CA3P07451 260 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PROZP22891 400 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PBX2P40425 430 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 GTF2BQ00403 316 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 POU5F1Q01860 360 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PRPF4BQ13523 1007 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 DCAF4L1Q3SXM0 396 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 UBXN11Q5T124 520 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PPP2R2DQ66LE6 453 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 ELOA2Q8IYF1 753 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 P2RX5Q93086 422 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 ZNF668Q96K58 619 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 TGS1Q96RS0 853 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PLIN2Q99541 437 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 C7orf25Q9BPX7 421 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 ADPGKQ9BRR6 497 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 STRA6Q9BX79 667 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 MRPL4Q9BYD3 311 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 TTYH1Q9H313 450 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PTPRHQ9HD43 1115 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 LMCD1Q9NZU5 365 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms