RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TRAIPQ9BWF2 469 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 C17orf75Q9HAS0 396 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 RC3H2Q9HBD1 1191 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 KMT5AQ9NQR1 393 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 FAM105AQ9NUU6 356 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 PRMT7Q9NVM4 692 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 STK17AQ9UEE5 414 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 KCNG1Q9UIX4 513 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 PCDHB2Q9Y5E7 798 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 A0A087X0B3 334 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 A0A1B0GUA9 196 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 EPOPA6NHQ4 379 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 RFXAPO00287 272 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 SLC16A4O15374 487 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 HOXA2O43364 376 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 ZNF623O75123 536 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 TBCAO75347 108 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 FAM13AO94988 1023 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 PRKCBP05771 671 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 PLS3P13797 630 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 FOSL2P15408 326 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 ATF7P17544 494 aaPredicted RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 IGFBP4P22692 258 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 SMTNP53814 917 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 ERVK-21P61565 698 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 GIT2Q14161 759 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 AMHR2Q16671 573 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 FAM187BQ17R55 369 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 EPC2Q52LR7 807 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 NAALADL2Q58DX5 795 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 UBXN11Q5T124 520 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 SV2BQ7L1I2 683 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 DYMQ7RTS9 669 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 ZNF598Q86UK7 904 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 CDR2LQ86X02 465 aaPredicted RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 TMEM192Q8IY95 271 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 MYCT1Q8N699 235 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 FBXO22Q8NEZ5 403 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 LEO1Q8WVC0 666 aaPredicted RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 LPPQ93052 612 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 PGBD4Q96DM1 585 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 NTPCRQ9BSD7 190 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 EIF2AQ9BY44 585 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 SCAND2PQ9GZW5 306 aaPredicted RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 TMEM117Q9H0C3 514 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 CCDC113Q9H0I3 377 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 FZD8Q9H461 694 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 ZHX3Q9H4I2 956 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 LARSQ9P2J5 1176 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 ODF2LQ9ULJ1 636 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 USP20Q9Y2K6 914 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 MRPL42Q9Y6G3 142 aaKnown RBP8.05□□□□□ -1.12
USP46-203ENST00000502443 CHD9Q3L8U1 2897 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 COL4A6Q14031 1691 aa8.05□□□□□ -1.12
USP46-203ENST00000502443 CNTNAP2Q9UHC6 1331 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 RALGAPA2Q2PPJ7 1873 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 TTLL13PA6NNM8 815 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 MEIS3P2A8K0S8 358 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 ACKR2O00590 384 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 N4BP3O15049 544 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 POLR2DO15514 142 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 NPTXRO95502 500 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CTNNB1P35222 781 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 BMPR1AP36894 532 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 STRN3Q13033 797 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 TPRNQ4KMQ1 711 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CLLU1OSQ5K130 101 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 SPOUT1Q5T280 376 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 RESP18Q5W5W9 173 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 SLC27A1Q6PCB7 646 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 MRPL10Q7Z7H8 261 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 HACE1Q8IYU2 909 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 IQUBQ8NA54 791 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 SMG8Q8ND04 991 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 CNNM3Q8NE01 707 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 GDPD5Q8WTR4 605 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 SPIRE2Q8WWL2 714 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 DDX12PQ92771 950 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 STAMQ92783 540 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CLP1Q92989 425 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 DHX58Q96C10 678 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CCDC51Q96ER9 411 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 SAMD11Q96NU1 681 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 CASD1Q96PB1 797 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 ADPGKQ9BRR6 497 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 APOL6Q9BWW8 343 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 PARVGQ9HBI0 331 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 TYW1Q9NV66 732 aaKnown RBP8.04□□□□□ -1.12
USP46-203ENST00000502443 ARHGAP28Q9P2N2 729 aa8.04□□□□□ -1.12
USP46-203ENST00000502443 INPP5FQ9Y2H2 1132 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms