RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	C12orf56	Q8IXR9	622 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	ZNF687	Q8N1G0	1237 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	SLC43A3	Q8NBI5	491 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	CTAGE1	Q96RT6	745 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	TSG101	Q99816	390 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	GBP3	Q9H0R5	595 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	TMEM206	Q9H813	350 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	DMAC2	Q9NW81	257 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	OGDHL	Q9ULD0	1010 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	LHX6	Q9UPM6	363 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	PHF24	Q9UPV7	400 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	CENPF	P49454	3210 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	PHLPP2	Q6ZVD8	1323 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	KAT6A	Q92794	2004 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	LRRIQ4	A6NIV6	560 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	EDN1	P05305	212 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	GNAT1	P11488	350 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	TMOD1	P28289	359 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	GPC3	P51654	580 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	FKBP3	Q00688	224 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	PTPN11	Q06124	597 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	MYBPC2	Q14324	1141 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	GDF6	Q6KF10	455 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	SLC39A4	Q6P5W5	647 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	RPAIN	Q86UA6	219 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	RHPN2	Q8IUC4	686 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	SLC9A9	Q8IVB4	645 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	CSGALNACT2	Q8N6G5	542 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	METTL13	Q8N6R0	699 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	C7orf31	Q8N865	590 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	RNF149	Q8NC42	400 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	ARRDC4	Q8NCT1	418 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	DEPTOR	Q8TB45	409 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	CEP63	Q96MT8	703 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	SRRT	Q9BXP5	876 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	ADAMTS10	Q9H324	1103 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	IFT122	Q9HBG6	1241 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	AGPAT3	Q9NRZ7	376 aa		13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	CGN	Q9P2M7	1197 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-231	ENST00000502394	LRRC10B	A6NIK2	292 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	DNM1L	O00429	736 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	CALU	O43852	315 aa	Predicted RBP	13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	GPR32	O75388	356 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	VTN	P04004	478 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	CYP2C9	P11712	490 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	EFNA5	P52803	228 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	MARS	P56192	900 aa	Known RBP	13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	TPM4	P67936	248 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	TFDP1	Q14186	410 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	FAM187B	Q17R55	369 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	FILIP1	Q7Z7B0	1213 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	ZNF410	Q86VK4	478 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	GOLGA5	Q8TBA6	731 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	MAP7D2	Q96T17	732 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	C2orf40	Q9H1Z8	148 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	FZD8	Q9H461	694 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	LIMA1	Q9UHB6	759 aa	Known RBP	13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	EXOC7	Q9UPT5	735 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	STYXL1	Q9Y6J8	313 aa		13.33	□□□□□ -0.28
MATR3-231	ENST00000502394	TRIP12	Q14669	1992 aa	Predicted RBP	13.32	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A1W2PQ45	241 aa	Predicted RBP	13.32	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A1W2PQY0	241 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	TISP43	B9A030	160 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	ANKRD63	C9JTQ0	380 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	NR3C1	P04150	777 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	EEF1G	P26641	437 aa	Known RBP	13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	ADSS	P30520	456 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	CHMP4BP1	P59074	171 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	MCCD1	P59942	119 aa	Predicted RBP	13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	CDC42EP1	Q00587	391 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	FANCC	Q00597	558 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	MBTD1	Q05BQ5	628 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	SPAG1	Q07617	926 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	CAMK2B	Q13554	666 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	ITGA7	Q13683	1181 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	AMHR2	Q16671	573 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	TPD52L1	Q16890	204 aa	Predicted RBP	13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	TCP11X2	Q5H9J9	407 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	TAF2	Q6P1X5	1199 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	HS2ST1	Q7LGA3	356 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	SERINC5	Q86VE9	423 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	DEFB118	Q96PH6	123 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	RNF208	Q9H0X6	261 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	MINDY3	Q9H8M7	445 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394	AKT3	Q9Y243	479 aa		13.32	□□□□□ -0.28
MATR3-231	ENST00000502394		A0A087WZ62	844 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	KCNJ18	B7U540	433 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394		K7ERI5	159 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	ABLIM1	O14639	778 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	CLIC2	O15247	247 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	FGFR1OP	O95684	399 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	SRGAP2C	P0DJJ0	459 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	NR2F2	P24468	414 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	PHKA2	P46019	1235 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	ADAM9	Q13443	819 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	KCNJ12	Q14500	433 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	KRT31	Q15323	416 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	HSP90AA4P	Q58FG1	418 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	SRGAP1	Q7Z6B7	1085 aa		13.31	□□□□□ -0.28
MATR3-231	ENST00000502394	ZBTB8OS	Q8IWT0	167 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms