RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ATP13A2	Q9NQ11	1180 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	RGL1	Q9NZL6	768 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	SMC3	Q9UQE7	1217 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	PPME1	Q9Y570	386 aa		11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.9	□□□□□ -0.5
CDK11A-222	ENST00000498810	CHD9	Q3L8U1	2897 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	GPR32	O75388	356 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	EIF4B	P23588	611 aa	Known RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	NPEPPS	P55786	919 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	ORC2	Q13416	577 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	GPM6B	Q13491	265 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	EMC2	Q15006	297 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	ZNF174	Q15697	407 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	EPC2	Q52LR7	807 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	TIGD5	Q53EQ6	642 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	HAUS3	Q68CZ6	603 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	B3GNT9	Q6UX72	402 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	SLC24A5	Q71RS6	500 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	ANO5	Q75V66	913 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	C4orf19	Q8IY42	314 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	CMTR2	Q8IYT2	770 aa	Known RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	TCP11	Q8WWU5	503 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	PSPC1	Q8WXF1	523 aa	Known RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	TSC1	Q92574	1164 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMX3	Q96JJ7	454 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	RAB34	Q9BZG1	259 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	ATP6V0A4	Q9HBG4	840 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	DACT1	Q9NYF0	836 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	MTCH2	Q9Y6C9	303 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810	ATG2A	Q2TAZ0	1938 aa		11.89	□□□□□ -0.51
CDK11A-222	ENST00000498810		A0A087WZ62	844 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TBKBP1	A7MCY6	615 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	DLL1	O00548	723 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	GAS2	O43903	313 aa	Known RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	MAF	O75444	373 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	DARS	P14868	501 aa	Known RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	FGFR4	P22455	802 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	GJB2	P29033	226 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TEC	P42680	631 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TRAPPC10	P48553	1259 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TARBP2	Q15633	366 aa	Known RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	AAK1	Q2M2I8	961 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TWF2	Q6IBS0	349 aa	Known RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	EP400NL	Q6ZTU2	488 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	CATSPER4	Q7RTX7	472 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	ZNF410	Q86VK4	478 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMX1	Q9H3N1	280 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	PIN4	Q9Y237	131 aa	Known RBP	11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	COL4A3BP	Q9Y5P4	624 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	PLXNA4	Q9HCM2	1894 aa		11.88	□□□□□ -0.51
CDK11A-222	ENST00000498810	CHD7	Q9P2D1	2997 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	MGEA5	O60502	916 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	DGKI	O75912	1065 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	ERLIN2	O94905	339 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	PHKA2	P46019	1235 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	DRP2	Q13474	957 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	TFDP1	Q14186	410 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	LINC01465	Q8N7H1	131 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	FOXJ1	Q92949	421 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMEM143	Q96AN5	459 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	PRDM6	Q9NQX0	595 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	RGS18	Q9NS28	235 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMEM161A	Q9NX61	479 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	LMCD1	Q9NZU5	365 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	WASF2	Q9Y6W5	498 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	EYS	Q5T1H1	3165 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	MYH11	P35749	1972 aa		11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	TCF20	Q9UGU0	1960 aa	Known RBP	11.87	□□□□□ -0.51
CDK11A-222	ENST00000498810	USO1	O60763	962 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	CSDE1	O75534	798 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	SRGAP2C	P0DJJ0	459 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	GATM	P50440	423 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	MRPS5	P82675	430 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	SPIRE1	Q08AE8	756 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	NCBP1	Q09161	790 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMEM132A	Q24JP5	1023 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	PPP2R3C	Q969Q6	453 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	MRPL38	Q96DV4	380 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMEM60	Q9H2L4	133 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	ADAMTS10	Q9H324	1103 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	PCDHB12	Q9Y5F1	795 aa		11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	MRPL42	Q9Y6G3	142 aa	Known RBP	11.86	□□□□□ -0.51
CDK11A-222	ENST00000498810	TRANK1	O15050	2925 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	IGKV6-21	A0A0C4DH24	114 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	VPS37C	A5D8V6	355 aa	Predicted RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	ARHGEF35	A5YM69	484 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810		C9IYK1	514 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810		H3BNC9	293 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	RB1	P06400	928 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	FGFR1	P11362	822 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	SKI	P12755	728 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	BMPR1A	P36894	532 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	CCT6A	P40227	531 aa	Known RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	MXD4	Q14582	209 aa	Predicted RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms